RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 PAXIP1Q6ZW49 1069 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 TANGO6Q9C0B7 1094 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 RANBP17Q9H2T7 1088 aaKnown RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 BIN2Q9UBW5 565 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 ABT1Q9ULW3 272 aaKnown RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 FZD1Q9UP38 647 aa13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 CTDP1Q9Y5B0 961 aaPredicted RBP13.25□□□□□ -0.29
SNRNP35-202ENST00000412157 KINO60870 393 aaKnown RBP13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 BACE1P56817 501 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 SNAP25P60880 206 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 FAM160A1Q05DH4 1040 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 ZNF174Q15697 407 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 INF2Q27J81 1249 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 NEK8Q86SG6 692 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 C12orf42Q96LP6 360 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 SLF1Q9BQI6 1058 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 DACT1Q9NYF0 836 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 TMOD4Q9NZQ9 345 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 ZHX2Q9Y6X8 837 aa13.24□□□□□ -0.29
SNRNP35-202ENST00000412157 RLFQ13129 1914 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 ABCB11O95342 1321 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 SYCE3A1L190 88 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 ADAMTS3O15072 1205 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 NR1I2O75469 434 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 VCAM1P19320 739 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 PTPREP23469 700 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 CMA1P23946 247 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 MCM7P33993 719 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 ORC2Q13416 577 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 VGLL4Q14135 290 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 AXDND1Q5T1B0 1012 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 MAP1SQ66K74 1059 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 ARMC9Q7Z3E5 817 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 TEX2Q8IWB9 1127 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 ANKRD13AQ8IZ07 590 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 PRPF38AQ8NAV1 312 aaKnown RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 FERMT2Q96AC1 680 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 TNMDQ9H2S6 317 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 GOLPH3LQ9H4A5 285 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 CLSTN2Q9H4D0 955 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 RPAP3Q9H6T3 665 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 TMEM260Q9NX78 707 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 PNMA2Q9UL42 364 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
SNRNP35-202ENST00000412157 GOLGA6L3A6NEY3 463 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 CTAGE5O15320 804 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 FLOT1O75955 427 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 FDX1P10109 184 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 ATP2C1P98194 919 aaPredicted RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 GRM1Q13255 1194 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 PTGDRQ13258 359 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 AP3B2Q13367 1082 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 UBE2SQ16763 222 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 LETM2Q2VYF4 491 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 TBCKQ8TEA7 893 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 NAP1L4Q99733 375 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 EMILIN3Q9NT22 766 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 MRPL11Q9Y3B7 192 aaKnown RBP13.22□□□□□ -0.29
SNRNP35-202ENST00000412157 A0A1B0GVL5 298 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 LAD1O00515 517 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 WNT7AO00755 349 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 ZBED4O75132 1171 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 PFKFB1P16118 471 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 HMGCS2P54868 508 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 RESP18Q5W5W9 173 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 ARL6IP4Q66PJ3 421 aaKnown RBP13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 DLK2Q6UY11 383 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 CLIC6Q96NY7 704 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 WBP1LQ9NX94 342 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 PPP1R9AQ9ULJ8 1098 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.29
SNRNP35-202ENST00000412157 A0A0G2JMZ2 1700 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 SPDYE3A6NKU9 549 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 CCNT1O60563 726 aaKnown RBP13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 FOSP01100 380 aaPredicted RBP13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 ICAM1P05362 532 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 HSPA8P11142 646 aaKnown RBP13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 SYKP43405 635 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 NDUFA8P51970 172 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 DGKZQ13574 1117 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 SH3D19Q5HYK7 790 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 L1TD1Q5T7N2 865 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms