RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 HLA-DQA1Q5Y7H0 255 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 RPTNQ6XPR3 784 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 TTLL10Q6ZVT0 673 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 JAMLQ86YT9 394 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 RASGRP4Q8TDF6 673 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 MZB1Q8WU39 189 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 FGD4Q96M96 766 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 MCMBPQ9BTE3 642 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 SRRTQ9BXP5 876 aaKnown RBP3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 KLHL25Q9H0H3 589 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 TNFRSF12AQ9NP84 129 aa3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 SF3B6Q9Y3B4 125 aaKnown RBP3.44□□□□□ -1.86
RNU2-54P-201ENST00000410299 A0A087WZG4 1122 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 RFXAPO00287 272 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 VAMP4O75379 141 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 BMP7P18075 431 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 TACR1P25103 407 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 GJA8P48165 433 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 SLC7A5Q01650 507 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 POU4F1Q01851 419 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 CBX2Q14781 532 aaPredicted RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 TCERG1LQ5VWI1 586 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 OLFML2BQ68BL8 750 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 HEATR6Q6AI08 1181 aaKnown RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 CYP2R1Q6VVX0 501 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 ADAT2Q7Z6V5 191 aaKnown RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 LDHDQ86WU2 507 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 IGDCC3Q8IVU1 814 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 FAM169BQ8N8A8 192 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 C19orf47Q8N9M1 422 aaKnown RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 KLHL6Q8WZ60 621 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 SHDQ96IW2 340 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 SPATA32Q96LK8 384 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 PTCHD1Q96NR3 888 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 ACBD3Q9H3P7 528 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 PHAXQ9H814 394 aaKnown RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 EPB41L4AQ9HCS5 686 aaPredicted RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 DIS3Q9Y2L1 958 aaKnown RBP3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 HCFC2Q9Y5Z7 792 aa3.43□□□□□ -1.86
RNU2-54P-201ENST00000410299 A0A1W2PQJ5 194 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 STXBP3O00186 592 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 IRS4O14654 1257 aaPredicted RBP3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 HOXA5P20719 270 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 BUD31P41223 144 aaPredicted RBP3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 ZNF200P98182 395 aaPredicted RBP3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 TMEM62Q0P6H9 643 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 VMACQ2NL98 169 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 DPY19L1Q2PZI1 675 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 PLEKHN1Q494U1 663 aaPredicted RBP3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 BICRALQ6AI39 1079 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 TMEFF1Q8IYR6 380 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 CPLX3Q8WVH0 158 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 DACT3Q96B18 629 aaPredicted RBP3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 GBP3Q9H0R5 595 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 ZCCHC4Q9H5U6 513 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 PDLIM7Q9NR12 457 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 WHRNQ9P202 907 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 SUSD2Q9UGT4 822 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 PLA2G2DQ9UNK4 145 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 PCDHA5Q9Y5H7 936 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 SLC12A7Q9Y666 1083 aa3.42□□□□□ -1.86
RNU2-54P-201ENST00000410299 AURKAO14965 403 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 TRIM13O60858 407 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 PPM1BO75688 479 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 TBC1D8O95759 1140 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 DBHP09172 617 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 L1CAMP32004 1257 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 MAPKAPK2P49137 400 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 AFF3P51826 1226 aaKnown RBP3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 NR1I3Q14994 352 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 RCSD1Q6JBY9 416 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 KIAA1211LQ6NV74 962 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 CNKSR3Q6P9H4 555 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 ZC3H14Q6PJT7 736 aaKnown RBP3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 PAQR3Q6TCH7 311 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 FAM129CQ86XR2 697 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 TMEM151BQ8IW70 566 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 MARCH10Q8NA82 808 aaPredicted RBP3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 RGS22Q8NE09 1264 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 OR6P1Q8NGX9 317 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 ANAPC16Q96DE5 110 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 C20orf173Q96LM9 149 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 PWWP2AQ96N64 755 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 TGIF2Q9GZN2 237 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 RXFP1Q9HBX9 757 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 PARD6AQ9NPB6 346 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 FBLN5Q9UBX5 448 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 CGGBP1Q9UFW8 167 aaPredicted RBP3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 INPP5FQ9Y2H2 1132 aa3.41□□□□□ -1.86
RNU2-54P-201ENST00000410299 ZC3H12DA2A288 527 aaKnown RBP3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 C2orf71A6NGG8 1288 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 F8W031 263 aaPredicted RBP3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 BUB1BO60566 1050 aaPredicted RBP3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 PPP1R11O60927 126 aaPredicted RBP3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 CYBBP04839 570 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 LIMS1P48059 325 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 SEPHS1P49903 392 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 CASP7P55210 303 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 CTSWP56202 376 aa3.4□□□□□ -1.87
RNU2-54P-201ENST00000410299 PRR5P85299 388 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms