RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 AARSD1Q9BTE6 412 aaKnown RBP6.32□□□□□ -1.4
LSM5-205ENST00000409952 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 FBRSQ9HAH7 460 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 CCDC39Q9UFE4 941 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 SPEF1Q9Y4P9 236 aa6.32□□□□□ -1.4
LSM5-205ENST00000409952 FAM83GA6ND36 823 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 SLC22A31A6NKX4 558 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
LSM5-205ENST00000409952 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 FOSP01100 380 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 POU3F2P20265 443 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 OXCT1P55809 520 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 SV2CQ496J9 727 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 YOD1Q5VVQ6 348 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 CDCP2Q5VXM1 449 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 DGKHQ86XP1 1220 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 HEXIM2Q96MH2 286 aaKnown RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 CCDC8Q9H0W5 538 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 ZNF180Q9UJW8 692 aa6.31□□□□□ -1.4
LSM5-205ENST00000409952 ZNF214Q9UL59 606 aaPredicted RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 NOB1Q9ULX3 412 aaKnown RBP6.31□□□□□ -1.4
LSM5-205ENST00000409952 RFPL1O75677 317 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 EOMESO95936 686 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 WNT11O96014 354 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
LSM5-205ENST00000409952 NKG7Q16617 165 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 BBS9Q3SYG4 887 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 TRIM61Q5EBN2 209 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 PKN3Q6P5Z2 889 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 VSIG10LQ86VR7 867 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 HID1Q8IV36 788 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 PPM1EQ8WY54 764 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 SSU72Q9NP77 194 aaKnown RBP6.3□□□□□ -1.4
LSM5-205ENST00000409952 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
LSM5-205ENST00000409952 PRAMEF27A3QJZ7 478 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 FAM86C2PA6NEL3 165 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 ABLIM3O94929 683 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 SLITRK5O94991 958 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 CST3P01034 146 aaPredicted RBP6.29□□□□□ -1.4
LSM5-205ENST00000409952 PURAQ00577 322 aaKnown RBP6.29□□□□□ -1.4
LSM5-205ENST00000409952 C22orf34Q6ZV56 151 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 CDC37L1Q7L3B6 337 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 TEX2Q8IWB9 1127 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 MRPL41Q8IXM3 137 aaKnown RBP6.29□□□□□ -1.4
LSM5-205ENST00000409952 NME8Q8N427 588 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 NAP1L4Q99733 375 aaKnown RBP6.29□□□□□ -1.4
LSM5-205ENST00000409952 FOXQ1Q9C009 403 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 TRIM39Q9HCM9 518 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 TRHDEQ9UKU6 1024 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 PLAGL2Q9UPG8 496 aa6.29□□□□□ -1.4
LSM5-205ENST00000409952 OAS3Q9Y6K5 1087 aaKnown RBP6.29□□□□□ -1.4
LSM5-205ENST00000409952 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 PRPF3O43395 683 aaKnown RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 DNAJA2O60884 412 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 FGAP02671 866 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 FGFR1P11362 822 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 PLCG1P19174 1290 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 GRK4P32298 578 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 NEK4P51957 841 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 PPP2R2AP63151 447 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 POU5F1BQ06416 359 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 PDE4BQ07343 736 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 MORC3Q14149 939 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 PCBP1Q15365 356 aaKnown RBP eCLIP6.28□□□□□ -1.4
LSM5-205ENST00000409952 TMEM201Q5SNT2 666 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 C10orf62Q5T681 223 aaPredicted RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 CXorf57Q6NSI4 855 aaKnown RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 CLEC4GQ6UXB4 293 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 MFSD2AQ8NA29 543 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 NETO1Q8TDF5 533 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 BCL7CQ8WUZ0 217 aaPredicted RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 JPH3Q8WXH2 748 aaPredicted RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 ZNF512BQ96KM6 892 aaPredicted RBP6.28□□□□□ -1.4
LSM5-205ENST00000409952 TTC1Q99614 292 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 RHOBTB2Q9BYZ6 727 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 TRIM8Q9BZR9 551 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 LRRC4CQ9HCJ2 640 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 LRP2BPQ9P2M1 347 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 TJP2Q9UDY2 1190 aa6.28□□□□□ -1.4
LSM5-205ENST00000409952 GABRDO14764 452 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 NRDCO43847 1150 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 F2P00734 622 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 ASLP04424 464 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 IFIT2P09913 472 aaKnown RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 U2AF1L5P0DN76 240 aaPredicted RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 ZSCAN20P17040 1043 aaPredicted RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 U2AF1Q01081 240 aaKnown RBP eCLIP6.27□□□□□ -1.41
LSM5-205ENST00000409952 SEPT7Q16181 437 aaKnown RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 MCATQ8IVS2 390 aaKnown RBP6.27□□□□□ -1.41
LSM5-205ENST00000409952 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
LSM5-205ENST00000409952 CNTD1Q8N815 330 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms