RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
LSM5-203ENST00000409782 TMEM67Q5HYA8 995 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 EEPD1Q7L9B9 569 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 UBASH3BQ8TF42 649 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 CEP41Q9BYV8 373 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 CBX8Q9HC52 389 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 BCL9O00512 1426 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 PARD3Q8TEW0 1356 aa8.1□□□□□ -1.11
LSM5-203ENST00000409782 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 CCDC163A0A0D9SF12 145 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 GFRA2O00451 464 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 DDAH1O94760 285 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 HSPA5P11021 654 aaKnown RBP8.09□□□□□ -1.11
LSM5-203ENST00000409782 GLB1P16278 677 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 PTPN11Q06124 597 aaPredicted RBP8.09□□□□□ -1.11
LSM5-203ENST00000409782 SSRP1Q08945 709 aaKnown RBP8.09□□□□□ -1.11
LSM5-203ENST00000409782 DOC2BQ14184 412 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 TKFCQ3LXA3 575 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 AGGF1Q8N302 714 aaeCLIP8.09□□□□□ -1.11
LSM5-203ENST00000409782 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 RNF208Q9H0X6 261 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 PHAXQ9H814 394 aaKnown RBP8.09□□□□□ -1.11
LSM5-203ENST00000409782 GMIPQ9P107 970 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 RGPD3A6NKT7 1758 aaPredicted RBP8.09□□□□□ -1.11
LSM5-203ENST00000409782 RGPD4Q7Z3J3 1758 aa8.09□□□□□ -1.11
LSM5-203ENST00000409782 KIF24Q5T7B8 1368 aa8.09□□□□□ -1.12
LSM5-203ENST00000409782 MAP3K19Q56UN5 1328 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 DIAPH1O60610 1272 aaKnown RBP8.08□□□□□ -1.12
LSM5-203ENST00000409782 HTR3BO95264 441 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 PPP2R5EQ16537 467 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 C6orf15Q6UXA7 325 aaPredicted RBP8.08□□□□□ -1.12
LSM5-203ENST00000409782 DEFB132Q7Z7B7 95 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 STAG1Q8WVM7 1258 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 IP6K1Q92551 441 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 ANKRD26Q9UPS8 1709 aa8.08□□□□□ -1.12
LSM5-203ENST00000409782 CGNL1Q0VF96 1302 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 SMG6Q86US8 1419 aaKnown RBP8.07□□□□□ -1.12
LSM5-203ENST00000409782 IQCA1LA6NCM1 817 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 TNFRSF10CO14798 259 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 FYB1O15117 783 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 POU4F3Q15319 338 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 DDB1Q16531 1140 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 DALRD3Q5D0E6 543 aaKnown RBP8.07□□□□□ -1.12
LSM5-203ENST00000409782 TMEM201Q5SNT2 666 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 HP1BP3Q5SSJ5 553 aaPredicted RBP8.07□□□□□ -1.12
LSM5-203ENST00000409782 MRM1Q6IN84 353 aaKnown RBP8.07□□□□□ -1.12
LSM5-203ENST00000409782 SPATC1Q76KD6 591 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 CORO1BQ9BR76 489 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 NSD2O96028 1365 aa8.07□□□□□ -1.12
LSM5-203ENST00000409782 RREB1Q92766 1687 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 LOC100289279A0A1B0GTE1 492 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 RFPL3O75679 317 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 PARNO95453 639 aaKnown RBP8.06□□□□□ -1.12
LSM5-203ENST00000409782 PDGFRBP09619 1106 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 HOXC9P31274 260 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 CDCP2Q5VXM1 449 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 ANKRD34AQ69YU3 496 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 RUFY4Q6ZNE9 571 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 Q6ZS46 218 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 TP53INP1Q96A56 240 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 SGSM3Q96HU1 749 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 NRSN2Q9GZP1 204 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 FLT4P35916 1363 aa8.06□□□□□ -1.12
LSM5-203ENST00000409782 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 B2RBV5 119 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 SART1O43290 800 aaKnown RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 GRIN3BO60391 1043 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 S100BP04271 92 aaPredicted RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 IL2RBP14784 551 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 MAOBP27338 520 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 AMPHP49418 695 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 HSP90AB2PQ58FF8 381 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 MAP1SQ66K74 1059 aaPredicted RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 HDXQ7Z353 690 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 DZIP1LQ8IYY4 767 aaKnown RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
LSM5-203ENST00000409782 MEGF10Q96KG7 1140 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 SPATA9Q9BWV2 254 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 CNNM2Q9H8M5 875 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 CYP4F12Q9HCS2 524 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 ADAM30Q9UKF2 790 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 INSRP06213 1382 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 NHSQ6T4R5 1651 aa8.05□□□□□ -1.12
LSM5-203ENST00000409782 NUP188Q5SRE5 1749 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 SBF2Q86WG5 1849 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 ADCY3O60266 1144 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 ASMTLO95671 621 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 FURINP09958 794 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 NME1P15531 152 aaKnown RBP8.04□□□□□ -1.12
LSM5-203ENST00000409782 ZNF143P52747 638 aaPredicted RBP8.04□□□□□ -1.12
LSM5-203ENST00000409782 PDE4BQ07343 736 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 TM4SF20Q53R12 229 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 WIPI1Q5MNZ9 446 aaPredicted RBP8.04□□□□□ -1.12
LSM5-203ENST00000409782 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
LSM5-203ENST00000409782 OVOS1Q6IE37 1185 aa8.04□□□□□ -1.12
LSM5-203ENST00000409782 NLRC3Q7RTR2 1065 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 1050.9 ms