RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 ZNF165P49910 485 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 ADCY7P51828 1080 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 NONOQ15233 471 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIMS2-206ENST00000409754 LONRF3Q496Y0 759 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-206ENST00000409754 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
LIMS2-206ENST00000409754 C4orf32Q8N8J7 132 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 KLRG1Q96E93 195 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 HOOK1Q9UJC3 728 aaKnown RBP16.03■□□□□ 0.16
LIMS2-206ENST00000409754 ZBTB21Q9ULJ3 1066 aa16.03■□□□□ 0.16
LIMS2-206ENST00000409754 INPP5BP32019 993 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 INF2Q27J81 1249 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 DNAJC5GQ8N7S2 189 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 COA7Q96BR5 231 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.16
LIMS2-206ENST00000409754 LAD1O00515 517 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 RAD21O60216 631 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 PPP1R11O60927 126 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 HUNKP57058 714 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ZRSR1Q15695 479 aaKnown RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 TRIM44Q96DX7 344 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 RIC8AQ9NPQ8 531 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 USP25Q9UHP3 1055 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ZNF112Q9UJU3 913 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 A0A1W2PRG0 241 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 VWA3AA6NCI4 1184 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 FAM155AB1AL88 458 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 PTPRFP10586 1907 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 BMP3P12645 472 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 FKBP1BP68106 108 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 KANK3Q6NY19 840 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 BTNL9Q6UXG8 535 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 C11orf57Q6ZUT1 292 aaPredicted RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 USP49Q70CQ1 688 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 SYMPKQ92797 1274 aaKnown RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ZIC5Q96T25 663 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 GLT8D2Q9H1C3 349 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 ABT1Q9ULW3 272 aaKnown RBP16.01■□□□□ 0.15
LIMS2-206ENST00000409754 TMX2Q9Y320 296 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 SNCAIPQ9Y6H5 919 aa16.01■□□□□ 0.15
LIMS2-206ENST00000409754 GJA5P36382 358 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 LONP1P36776 959 aaKnown RBP16■□□□□ 0.15
LIMS2-206ENST00000409754 CAP2P40123 477 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 PRPHP41219 470 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 NLRP12P59046 1061 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 MDM2Q00987 491 aaPredicted RBP16■□□□□ 0.15
LIMS2-206ENST00000409754 VGLL4Q14135 290 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 IQCB1Q15051 598 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 QRICH1Q2TAL8 776 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 NEK8Q86SG6 692 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 ZKSCAN4Q969J2 545 aaPredicted RBP16■□□□□ 0.15
LIMS2-206ENST00000409754 CCDC34Q96HJ3 373 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 PYM1Q9BRP8 204 aaKnown RBP16■□□□□ 0.15
LIMS2-206ENST00000409754 BIN2Q9UBW5 565 aaPredicted RBP16■□□□□ 0.15
LIMS2-206ENST00000409754 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
LIMS2-206ENST00000409754 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-206ENST00000409754 ACTN4O43707 911 aaKnown RBP15.99■□□□□ 0.15
LIMS2-206ENST00000409754 NF2P35240 595 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 MRPL12P52815 198 aaKnown RBP15.99■□□□□ 0.15
LIMS2-206ENST00000409754 CDC37Q16543 378 aaPredicted RBP15.99■□□□□ 0.15
LIMS2-206ENST00000409754 IL17AQ16552 155 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 HS1BP3Q53T59 392 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 SYDE2Q5VT97 1194 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 CYP4F22Q6NT55 531 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 CUL5Q93034 780 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 EPSTI1Q96J88 318 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 WRNIP1Q96S55 665 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 BPIFA3Q9BQP9 254 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 GOPCQ9HD26 462 aa15.99■□□□□ 0.15
LIMS2-206ENST00000409754 ADCY5O95622 1261 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 CLK2P49760 499 aaKnown RBP15.98■□□□□ 0.15
LIMS2-206ENST00000409754 PNOCQ13519 176 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 TTLL12Q14166 644 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-206ENST00000409754 RASAL3Q86YV0 1011 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 HHIPL1Q96JK4 782 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-206ENST00000409754 ZNF341Q9BYN7 854 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
LIMS2-206ENST00000409754 TMEM232C9JQI7 657 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 PPP1R12BO60237 982 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-206ENST00000409754 ASNSP08243 561 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 ECE1P42892 770 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 VEGFBP49765 207 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 POSTNQ15063 836 aa15.97■□□□□ 0.15
LIMS2-206ENST00000409754 LETM2Q2VYF4 491 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms