RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ELF1P32519 619 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 RDXP35241 583 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 VPS72Q15906 364 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 MB21D1Q8N884 522 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 OR8K1Q8NGG5 319 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 BCAS4Q8TDM0 211 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 CAPZA3Q96KX2 299 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 LUC7L2Q9Y383 392 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 CAPN7Q9Y6W3 813 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 CASZ1Q86V15 1759 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 ZC3H4Q9UPT8 1303 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 PP2D1A8MPX8 630 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 SCP2P22307 547 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 TRAPPC11Q7Z392 1133 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 COG1Q8WTW3 980 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 MIEF2Q96C03 454 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 EEF2KMTQ96G04 330 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 PYM1Q9BRP8 204 aaKnown RBP17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 BRIP1Q9BX63 1249 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 MCM8Q9UJA3 840 aa17.82■□□□□ 0.44
CHMP1A-201ENST00000397901 HERVK_113P62684 666 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 AMOTL1Q8IY63 956 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 GPKOWQ92917 476 aaPredicted RBP eCLIP17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 MMS19Q96T76 1030 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 FAM205AQ6ZU69 1335 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 MYH13Q9UKX3 1938 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 A0A1B0GUL6 1792 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 H7C1D1 291 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 CHUKO15111 745 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 TBC1D22AQ8WUA7 517 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 CRACR2AQ9BSW2 395 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
CHMP1A-201ENST00000397901 GOLGA6CA6NDK9 693 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 LGALS16A8MUM7 142 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 H0YHG0 523 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 EIF3HO15372 352 aaKnown RBP eCLIP17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 FSBPO95073 299 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 GOLGA6DP0CG33 693 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 CYP2D6P10635 497 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 GGCXP38435 758 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 FNTAP49354 379 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 PFKFB3Q16875 520 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 WDR59Q6PJI9 974 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 TRIM47Q96LD4 638 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 GOLGA6AQ9NYA3 693 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 ZNF804BA4D1E1 1349 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 PSMD14O00487 310 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 LONP1P36776 959 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 USP14P54578 494 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 PPP2R5AQ15172 486 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 TSR1Q2NL82 804 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 ERFEQ4G0M1 354 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 B4GALNT4Q76KP1 1039 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 KIAA1328Q86T90 577 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 GDAP1L1Q96MZ0 367 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 C8orf37Q96NL8 207 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 HAUS4Q9H6D7 363 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 DISC1Q9NRI5 854 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 CNTNAP4Q9C0A0 1308 aa17.8■□□□□ 0.44
CHMP1A-201ENST00000397901 KIF3CO14782 793 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 ZMYND10O75800 440 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 SPATS2Q86XZ4 545 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 C4orf32Q8N8J7 132 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 DNAJC7Q99615 494 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 VEZTQ9HBM0 779 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 SAR1BQ9Y6B6 198 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 B4DLN1 442 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 FGRP09769 529 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 KCNQ4P56696 695 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 PREPLQ4J6C6 727 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 NAALADL2Q58DX5 795 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 NGLY1Q96IV0 654 aa17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP1A-201ENST00000397901 CACNA1SQ13698 1873 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 TMCO5BA8MYB1 307 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 KIAA0754O94854 1291 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 NF2P35240 595 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 KLK7P49862 253 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 SF3B3Q15393 1217 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 BLIDQ8IZY5 108 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 ZNF507Q8TCN5 953 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 CAPN11Q9UMQ6 739 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 TAF1P21675 1872 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 RGL2O15211 777 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 ARL6IP4Q66PJ3 421 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 GSPT2Q8IYD1 628 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 OTUD6BQ8N6M0 293 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 JAKMIP2Q96AA8 810 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
CHMP1A-201ENST00000397901 MAGEC2Q9UBF1 373 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms