RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 AP3B2Q13367 1082 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 DGKZQ13574 1117 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 JMYQ8N9B5 988 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 TMEM87AQ8NBN3 555 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 OXER1Q8TDS5 423 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 SHISA4Q96DD7 197 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 RTEL1Q9NZ71 1219 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 PCDHA6Q9UN73 950 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 SLC45A1Q9Y2W3 748 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 PCDHA8Q9Y5H6 950 aa15.65■□□□□ 0.1
VAPB-202ENST00000395802 M0R2N6 131 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 ATP2A1O14983 1001 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 FIBPO43427 364 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 YEATS4O95619 227 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 NONOQ15233 471 aaKnown RBP eCLIP15.64■□□□□ 0.093e-10■■■■■ 27.6
VAPB-202ENST00000395802 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 PIK3AP1Q6ZUJ8 805 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 KCNG4Q8TDN1 519 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 TNFRSF25Q93038 417 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 PIK3CDO00329 1044 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 SF3A1Q15459 793 aaKnown RBP15.64■□□□□ 0.09
VAPB-202ENST00000395802 SKOR2Q2VWA4 1001 aaPredicted RBP15.64■□□□□ 0.09
VAPB-202ENST00000395802 TKFCQ3LXA3 575 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 SPRYD7Q5W111 196 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 ANO1Q5XXA6 986 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
VAPB-202ENST00000395802 NAP1L4Q99733 375 aaKnown RBP15.64■□□□□ 0.09
VAPB-202ENST00000395802 SPDYE3A6NKU9 549 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 PRPF40AO75400 957 aaKnown RBP15.63■□□□□ 0.09
VAPB-202ENST00000395802 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
VAPB-202ENST00000395802 ZNF157P51786 506 aaPredicted RBP15.63■□□□□ 0.09
VAPB-202ENST00000395802 SNAP25P60880 206 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 ORC2Q13416 577 aaPredicted RBP15.63■□□□□ 0.09
VAPB-202ENST00000395802 STK38Q15208 465 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 TREML2Q5T2D2 321 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 LBX2Q6XYB7 198 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 CPXCR1Q8N123 301 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 ATG4CQ96DT6 458 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 USP28Q96RU2 1077 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 TEX13BQ9BXU2 312 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 EHMT1Q9H9B1 1298 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 TFIP11Q9UBB9 837 aaKnown RBP15.63■□□□□ 0.09
VAPB-202ENST00000395802 LOC285556D6RIA3 1793 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 PTPRFP10586 1907 aa15.63■□□□□ 0.09
VAPB-202ENST00000395802 SPDYE16A6NNV3 312 aaPredicted RBP15.62■□□□□ 0.09
VAPB-202ENST00000395802 GCOM1H8Y6P7 765 aaPredicted RBP15.62■□□□□ 0.09
VAPB-202ENST00000395802 POLR2MP0CAP2 368 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 YY1P25490 414 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 RGMBQ6NW40 437 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 CCDC102AQ96A19 550 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 HHIPL1Q96JK4 782 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 BIN2Q9UBW5 565 aaPredicted RBP15.62■□□□□ 0.09
VAPB-202ENST00000395802 RCOR1Q9UKL0 485 aa15.62■□□□□ 0.09
VAPB-202ENST00000395802 CCL15-CCL14A0A0B4J2E2 113 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 TMEM88BA6NKF7 163 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 COPB2P35606 906 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 CLK2P49760 499 aaKnown RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 CCL15Q16663 113 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 LEO1Q8WVC0 666 aaPredicted RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 TLL2Q9Y6L7 1015 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 ZNF536O15090 1300 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 MANSC4A6NHS7 340 aaPredicted RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 GJA5P36382 358 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 INHBEP58166 350 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 UBE2HP62256 183 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 CEBPZQ03701 1054 aaKnown RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 JAKMIP3Q5VZ66 844 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 ANKRD23Q86SG2 305 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 NEK8Q86SG6 692 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 LINC00301Q8NCQ3 95 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 AGBL1Q96MI9 1066 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 ASCC2Q9H1I8 757 aaPredicted RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 RAVER2Q9HCJ3 691 aaKnown RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 RABGAP1Q9Y3P9 1069 aa15.61■□□□□ 0.09
VAPB-202ENST00000395802 MORC2Q9Y6X9 1032 aaPredicted RBP15.61■□□□□ 0.09
VAPB-202ENST00000395802 SPTLC2O15270 562 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 PPP6R2O75170 966 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 MBD3O95983 291 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 ALAS1P13196 640 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 STAT3P40763 770 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 SLC39A14Q15043 492 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 KLHL40Q2TBA0 621 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 TTC38Q5R3I4 469 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 SNRNP48Q6IEG0 339 aaKnown RBP15.6■□□□□ 0.09
VAPB-202ENST00000395802 MS4A4AQ96JQ5 239 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 GDPD2Q9HCC8 539 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.6■□□□□ 0.09
VAPB-202ENST00000395802 FBXO40Q9UH90 709 aa15.6■□□□□ 0.09
VAPB-202ENST00000395802 ABT1Q9ULW3 272 aaKnown RBP15.6■□□□□ 0.09
VAPB-202ENST00000395802 LAD1O00515 517 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 MEIS2O14770 477 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 CFBP00751 764 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 HERVK_113P62684 666 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 MOGSQ13724 837 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 REPS2Q8NFH8 660 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 RASGRP4Q8TDF6 673 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 TRERF1Q96PN7 1200 aa15.59■□□□□ 0.09
VAPB-202ENST00000395802 ZCCHC17Q9NP64 241 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms