RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 REXO1Q8N1G1 1221 aaKnown RBP17.32■□□□□ 0.36
PTPN20-206ENST00000395722 RASGRP4Q8TDF6 673 aa17.32■□□□□ 0.36
PTPN20-206ENST00000395722 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
PTPN20-206ENST00000395722 RTEL1Q9NZ71 1219 aa17.32■□□□□ 0.36
PTPN20-206ENST00000395722 TFIP11Q9UBB9 837 aaKnown RBP17.32■□□□□ 0.36
PTPN20-206ENST00000395722 CFAP45Q9UL16 551 aa17.32■□□□□ 0.36
PTPN20-206ENST00000395722 COL11A1P12107 1806 aaPredicted RBP17.32■□□□□ 0.36
PTPN20-206ENST00000395722 DDX11L8A8MPP1 907 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 CETPP11597 493 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 AGBL1Q96MI9 1066 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 SCAND2PQ9GZW5 306 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 RCOR1Q9UKL0 485 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 TLL2Q9Y6L7 1015 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 TRAPPC10P48553 1259 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 PABPC4Q13310 644 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 POTEEQ6S8J3 1075 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 FTOQ9C0B1 505 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 ZNF214Q9UL59 606 aaPredicted RBP17.31■□□□□ 0.36
PTPN20-206ENST00000395722 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 SLC45A1Q9Y2W3 748 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 ELP1O95163 1332 aa17.31■□□□□ 0.36
PTPN20-206ENST00000395722 GOLGA6L22H0YM25 854 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 PIK3CDO00329 1044 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 MEIS2O14770 477 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 NCLP19338 710 aaKnown RBP17.3■□□□□ 0.36
PTPN20-206ENST00000395722 GHRHRQ02643 423 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 FSTL1Q12841 308 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 PIK3AP1Q6ZUJ8 805 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
PTPN20-206ENST00000395722 GDPD2Q9HCC8 539 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 RAVER2Q9HCJ3 691 aaKnown RBP17.3■□□□□ 0.36
PTPN20-206ENST00000395722 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
PTPN20-206ENST00000395722 CCDC194A0A1B0GVG4 234 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 FIBPO43427 364 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 MB21D1Q8N884 522 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 ZNF784Q8NCA9 323 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 BRI3BPQ8WY22 251 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 BIN2Q9UBW5 565 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 CCL15-CCL14A0A0B4J2E2 113 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 TESPA1A2RU30 521 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 YEATS4O95619 227 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 YY1P25490 414 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 IRX3P78415 501 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 TMEM132BQ14DG7 1078 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 CCL15Q16663 113 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 UBE2SQ16763 222 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 CSPP1Q1MSJ5 1256 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 RGMBQ6NW40 437 aa17.29■□□□□ 0.36
PTPN20-206ENST00000395722 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 MORC2Q9Y6X9 1032 aaPredicted RBP17.29■□□□□ 0.36
PTPN20-206ENST00000395722 AP3B2Q13367 1082 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 NONOQ15233 471 aaKnown RBP eCLIP17.28■□□□□ 0.36
PTPN20-206ENST00000395722 PTPAQ15257 358 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 JAKMIP3Q5VZ66 844 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 ANKRD23Q86SG2 305 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 CPXCR1Q8N123 301 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 LINC00301Q8NCQ3 95 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 SPATA32Q96LK8 384 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 CTDP1Q9Y5B0 961 aaPredicted RBP17.28■□□□□ 0.36
PTPN20-206ENST00000395722 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
PTPN20-206ENST00000395722 WNT7AO00755 349 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 PTMSP20962 102 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 OSBPP22059 807 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 HERVK_113P62684 666 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
PTPN20-206ENST00000395722 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.28■□□□□ 0.36
PTPN20-206ENST00000395722 TMEM88BA6NKF7 163 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 BTBD19C9JJ37 291 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 PRPF40AO75400 957 aaKnown RBP17.27■□□□□ 0.36
PTPN20-206ENST00000395722 SLC10A3P09131 477 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 ZNF157P51786 506 aaPredicted RBP17.27■□□□□ 0.36
PTPN20-206ENST00000395722 NBR1Q14596 966 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
PTPN20-206ENST00000395722 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 PCDHB6Q9Y5E3 794 aa17.27■□□□□ 0.36
PTPN20-206ENST00000395722 EDIL3O43854 480 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 CNMDO75829 334 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 HSD17B4P51659 736 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 CEBPZQ03701 1054 aaKnown RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 MKRN3Q13064 507 aaKnown RBP17.26■□□□□ 0.35
PTPN20-206ENST00000395722 INF2Q27J81 1249 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
PTPN20-206ENST00000395722 MAF1Q9H063 256 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms