RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ERVK-24P63145 666 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 TCP11X2Q5H9J9 407 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 C16orf86Q6ZW13 317 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 KBTBD4Q9NVX7 518 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 GOLGA6L9A6NEM1 432 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 MRPS25P82663 173 aaKnown RBP17.42■□□□□ 0.38
PTBP1-204ENST00000394601 ZNF569Q5MCW4 686 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 ADSSL1Q8N142 457 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 EXOC4Q96A65 974 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 ZMYND12Q9H0C1 365 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 CPVLQ9H3G5 476 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 GUCY2CP25092 1073 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 RRAGBQ5VZM2 374 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 MAPKAPK5Q8IW41 473 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 NGLY1Q96IV0 654 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 NCAPGQ9BPX3 1015 aa17.42■□□□□ 0.38
PTBP1-204ENST00000394601 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
PTBP1-204ENST00000394601 INF2Q27J81 1249 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 NELFBQ8WX92 580 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 GOLGA8HP0CJ92 632 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 MAGEA9P43362 315 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 PAK1Q13153 545 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 PNKPQ96T60 521 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 PYM1Q9BRP8 204 aaKnown RBP17.41■□□□□ 0.38
PTBP1-204ENST00000394601 SPZ1Q9BXG8 430 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 CCSER1Q9C0I3 900 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 CD209Q9NNX6 404 aa17.41■□□□□ 0.38
PTBP1-204ENST00000394601 SAP30BPQ9UHR5 308 aaKnown RBP17.41■□□□□ 0.38
PTBP1-204ENST00000394601 IVLP07476 585 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 TSPY3P0CV98 308 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 TSPY8P0CW00 308 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 CCT6AP40227 531 aaKnown RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 CCT5P48643 541 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 COPB1P53618 953 aaKnown RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 CDK8P49336 464 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 GALNT17Q6IS24 598 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 GSPT2Q8IYD1 628 aaKnown RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 ZNF507Q8TCN5 953 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 EHD4Q9H223 541 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 SAMM50Q9Y512 469 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 TRIM49BA6NDI0 452 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 PES1O00541 588 aaKnown RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 TPM1P09493 284 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 PRPHP41219 470 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 BTDP43251 543 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 KCNB1Q14721 858 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 FAM196AQ6ZSG2 479 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 FAM163AQ96GL9 167 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 MKNK2Q9HBH9 465 aa17.4■□□□□ 0.38
PTBP1-204ENST00000394601 GREB1LQ9C091 1923 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-204ENST00000394601 GAKO14976 1311 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 EIF3JO75822 258 aaKnown RBP17.39■□□□□ 0.37
PTBP1-204ENST00000394601 GSTO1P78417 241 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 ABHD10Q9NUJ1 306 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 FRMD3A2A2Y4 597 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 ARHGAP25P42331 645 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 GNAQP50148 359 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 CAPZA3Q96KX2 299 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 MAPK8IP1Q9UQF2 711 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
PTBP1-204ENST00000394601 KCNJ18B7U540 433 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 RHOBTB3O94955 611 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 BAG3O95817 575 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 CCDC175P0C221 793 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 RFC4P35249 363 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 KCNJ12Q14500 433 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 GPIHBP1Q8IV16 184 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 GIMAP8Q8ND71 665 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-204ENST00000394601 PPM1EQ8WY54 764 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 MMTAG2Q9BU76 263 aaKnown RBP17.38■□□□□ 0.37
PTBP1-204ENST00000394601 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 ANKRD31Q8N7Z5 1873 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 KLRF2D3W0D1 207 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 TXLNAP40222 546 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 STAT6P42226 847 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 DTHD1Q6ZMT9 781 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 FAM107BQ9H098 131 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 GEMIN8Q9NWZ8 242 aaKnown RBP17.38■□□□□ 0.37
PTBP1-204ENST00000394601 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 HDXQ7Z353 690 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 ANKRD20A12PQ8NF67 263 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 VPS16Q9H269 839 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 TAB2Q9NYJ8 693 aa17.38■□□□□ 0.37
PTBP1-204ENST00000394601 REXO2Q9Y3B8 237 aaKnown RBP17.38■□□□□ 0.37
PTBP1-204ENST00000394601 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.372e-8■□□□□ 10.2
PTBP1-204ENST00000394601 GYS1P13807 737 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 MAP2K2P36507 400 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 VSNL1P62760 191 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
PTBP1-204ENST00000394601 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-204ENST00000394601 CCDC51Q96ER9 411 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms