RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.06□□□□□ -1.92
TRAV41-201ENST00000390468 KCPQ6ZWJ8 1503 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 SUGP1Q8IWZ8 645 aaKnown RBP3.06□□□□□ -1.92
TRAV41-201ENST00000390468 TTC5Q8N0Z6 440 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 CACTIN-AS1Q8N1I8 211 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 KLHL23Q8NBE8 558 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 IL17REQ8NFR9 667 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 PPM1EQ8WY54 764 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 SSH1Q8WYL5 1049 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 PIK3R5Q8WYR1 880 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 ANKRD7Q92527 254 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 FAM83CQ9BQN1 747 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 STK31Q9BXU1 1019 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 OSBPL1AQ9BXW6 950 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 ANTXR1Q9H6X2 564 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 TNS1Q9HBL0 1735 aaKnown RBP3.06□□□□□ -1.92
TRAV41-201ENST00000390468 TOMM22Q9NS69 142 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 CPSF2Q9P2I0 782 aaKnown RBP3.06□□□□□ -1.92
TRAV41-201ENST00000390468 LEMD3Q9Y2U8 911 aa3.06□□□□□ -1.92
TRAV41-201ENST00000390468 V9GYY5 206 aaPredicted RBP3.06□□□□□ -1.92
TRAV41-201ENST00000390468 MYH6P13533 1939 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 SPATA31A6Q5VVP1 1343 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 TMCO5BA8MYB1 307 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 CHL1O00533 1208 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 VAMP4O75379 141 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 TRPA1O75762 1119 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ZRANB2O95218 330 aaKnown RBP eCLIP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 SMC2O95347 1197 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 HOXD8P13378 290 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ACPPP15309 386 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 EIF2S2P20042 333 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 CYP2C19P33261 490 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 NAP1L1P55209 391 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 TRAF1Q13077 416 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 MVPQ14764 893 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 RBBP5Q15291 538 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ZSCAN26Q16670 478 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 C20orf194Q5TEA3 1177 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 CCDC30Q5VVM6 783 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 SPTY2D1Q68D10 685 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ANKRD34AQ69YU3 496 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 C16orf46Q6P387 395 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ATF7IPQ6VMQ6 1270 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 LEKR1Q6ZMV7 388 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 CAPN12Q6ZSI9 719 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ITPRIPQ8IWB1 547 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 FAM177A1Q8N128 213 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 TSPYL6Q8N831 410 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 C12orf50Q8NA57 414 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 C8orf58Q8NAV2 365 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF397Q8NF99 534 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ZCRB1Q8TBF4 217 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 PANK1Q8TE04 598 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 STK32AQ8WU08 396 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 DRC1Q96MC2 740 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 C8orf37Q96NL8 207 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 CEP89Q96ST8 783 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 USP26Q9BXU7 913 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 PBX4Q9BYU1 374 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 API5Q9BZZ5 524 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 RNF208Q9H0X6 261 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 SLC52A2Q9HAB3 445 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 LGR6Q9HBX8 967 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 SPATS2LQ9NUQ6 558 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 MIS18AQ9NYP9 233 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 PIM2Q9P1W9 311 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 DDX41Q9UJV9 622 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ZMIZ1Q9ULJ6 1067 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 NOB1Q9ULX3 412 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 DDX19BQ9UMR2 479 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 THRAP3Q9Y2W1 955 aaKnown RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 MORC2Q9Y6X9 1032 aaPredicted RBP3.05□□□□□ -1.92
TRAV41-201ENST00000390468 COL24A1Q17RW2 1714 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 ARAP2Q8WZ64 1704 aa3.05□□□□□ -1.92
TRAV41-201ENST00000390468 RGS12O14924 1447 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ABCC4O15439 1325 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 PTPRCP08575 1304 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ANKRD18BA2A2Z9 1011 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 GOLGA6CA6NDK9 693 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 GOLGA6BA6NDN3 693 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 H3BRJ5 948 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 MYO1CO00159 1063 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 CYP27B1O15528 508 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 COQ9O75208 318 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 F13BP05160 661 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 C8AP07357 584 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 HOXB7P09629 217 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 GOLGA6DP0CG33 693 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 TRIM27P14373 513 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ABCD1P33897 745 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 MAGEA9P43362 315 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ZAP70P43403 619 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 ZNF445P59923 1031 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 JAG1P78504 1218 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 SLC39A6Q13433 755 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 MYBPC2Q14324 1141 aa3.04□□□□□ -1.92
TRAV41-201ENST00000390468 BMS1Q14692 1282 aaKnown RBP3.04□□□□□ -1.92
TRAV41-201ENST00000390468 DDB1Q16531 1140 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms