RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PPP1R13LQ8WUF5 828 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 CLIP2Q9UDT6 1046 aa14.16□□□□□ -0.14
SOD1-202ENST00000389995 CTDP1Q9Y5B0 961 aaPredicted RBP14.16□□□□□ -0.14
SOD1-202ENST00000389995 SOWAHBA6NEL2 793 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 ERC2O15083 957 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 DYNC1LI2O43237 492 aaPredicted RBP14.15□□□□□ -0.14
SOD1-202ENST00000389995 IFIT2P09913 472 aaKnown RBP14.15□□□□□ -0.14
SOD1-202ENST00000389995 CYP2C9P11712 490 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 SMPD1P17405 629 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
SOD1-202ENST00000389995 AAK1Q2M2I8 961 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 SPRED2Q7Z698 418 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 AGBL1Q96MI9 1066 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 PUS7LQ9H0K6 701 aaKnown RBP14.15□□□□□ -0.14
SOD1-202ENST00000389995 SLC38A10Q9HBR0 1119 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 GNEQ9Y223 722 aaKnown RBP14.15□□□□□ -0.14
SOD1-202ENST00000389995 HCN4Q9Y3Q4 1203 aa14.15□□□□□ -0.14
SOD1-202ENST00000389995 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.15
SOD1-202ENST00000389995 ATP2A1O14983 1001 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 TLL1O43897 1013 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 NKX3-2P78367 333 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
SOD1-202ENST00000389995 CLASRPQ8N2M8 674 aaKnown RBP14.14□□□□□ -0.15
SOD1-202ENST00000389995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.14□□□□□ -0.15
SOD1-202ENST00000389995 ARNTL2Q8WYA1 636 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 C11orf16Q9NQ32 467 aa14.14□□□□□ -0.15
SOD1-202ENST00000389995 TRMT13Q9NUP7 481 aaKnown RBP14.14□□□□□ -0.15
SOD1-202ENST00000389995 MINDY4BA8MYZ0 360 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 PRDM1O75626 825 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 SNAP25P60880 206 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 TMEM31Q5JXX7 168 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 FBXO16Q8IX29 292 aaPredicted RBP14.13□□□□□ -0.15
SOD1-202ENST00000389995 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
SOD1-202ENST00000389995 FAM133AQ8N9E0 248 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 CHST13Q8NET6 341 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 PURBQ96QR8 312 aaKnown RBP14.13□□□□□ -0.15
SOD1-202ENST00000389995 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 NYAP2Q9P242 653 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 ISY1Q9ULR0 285 aaKnown RBP14.13□□□□□ -0.15
SOD1-202ENST00000389995 SCN10AQ9Y5Y9 1956 aa14.13□□□□□ -0.15
SOD1-202ENST00000389995 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
SOD1-202ENST00000389995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
SOD1-202ENST00000389995 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
SOD1-202ENST00000389995 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.15
SOD1-202ENST00000389995 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
SOD1-202ENST00000389995 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
SOD1-202ENST00000389995 A1CFQ9NQ94 594 aaKnown RBP14.12□□□□□ -0.15
SOD1-202ENST00000389995 FBXO40Q9UH90 709 aa14.12□□□□□ -0.15
SOD1-202ENST00000389995 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
SOD1-202ENST00000389995 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 CABYRO75952 493 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 TAP1Q03518 808 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 KIF1BPQ96EK5 621 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 RNF146Q9NTX7 359 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 ARPP21Q9UBL0 812 aaPredicted RBP14.11□□□□□ -0.15
SOD1-202ENST00000389995 ZNF536O15090 1300 aa14.11□□□□□ -0.15
SOD1-202ENST00000389995 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 POU3F3P20264 500 aaPredicted RBP14.1□□□□□ -0.15
SOD1-202ENST00000389995 GRB10Q13322 594 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 UBE3CQ15386 1083 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 MUM1L1Q5H9M0 696 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 TMCO2Q7Z6W1 182 aaPredicted RBP14.1□□□□□ -0.15
SOD1-202ENST00000389995 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
SOD1-202ENST00000389995 HAUS7Q99871 368 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 SIP14410 1827 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 TNKSO95271 1327 aa14.1□□□□□ -0.15
SOD1-202ENST00000389995 ASB14A6NK59 587 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 TMEM232C9JQI7 657 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 ZEB2O60315 1214 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 BMP3P12645 472 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 ALAS1P13196 640 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 ATP5JP18859 108 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 OAZ1P54368 228 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 SLFN13Q68D06 897 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 RASGRP2Q7LDG7 609 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 ALYREFQ86V81 257 aaKnown RBP14.09□□□□□ -0.15
SOD1-202ENST00000389995 SIRT2Q8IXJ6 389 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 HLA-CQ95604 372 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 TRERF1Q96PN7 1200 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 COG5Q9UP83 839 aa14.09□□□□□ -0.15
SOD1-202ENST00000389995 MYH7BA7E2Y1 1941 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 LCHNA4D1U4 455 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 LPXNO60711 386 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 MYL3P08590 195 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 IKQ13123 557 aaPredicted RBP14.08□□□□□ -0.16
SOD1-202ENST00000389995 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
SOD1-202ENST00000389995 MKL1Q969V6 931 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms