RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 CDC27P30260 824 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 TRPC3Q13507 836 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 FBXO38Q6PIJ6 1188 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 GBP6Q6ZN66 633 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 ZNF354CQ86Y25 554 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 CHURC1Q8WUH1 139 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 EEF1GP26641 437 aaKnown RBP18.89■□□□□ 0.61
SGCB-201ENST00000381431 PRDX5P30044 214 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.61
SGCB-201ENST00000381431 GNGT1P63211 74 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 UBXN2AP68543 259 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 SETDB1Q15047 1291 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 NEDD4P46934 1319 aa18.89■□□□□ 0.61
SGCB-201ENST00000381431 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
SGCB-201ENST00000381431 GUCY2DQ02846 1103 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 ZNF658Q5TYW1 1059 aaPredicted RBP18.88■□□□□ 0.61
SGCB-201ENST00000381431 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 OXER1Q8TDS5 423 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.88■□□□□ 0.61
SGCB-201ENST00000381431 CYP2D6P10635 497 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 KCTD16Q68DU8 428 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 MIER3Q7Z3K6 550 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 TXNDC16Q9P2K2 825 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 XDHP47989 1333 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 SEMA3EO15041 775 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 NR2F2P24468 414 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 PNMA8AQ86V59 439 aaPredicted RBP18.88■□□□□ 0.61
SGCB-201ENST00000381431 BCAS4Q8TDM0 211 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 CLCN6P51797 869 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 TBC1D10BQ4KMP7 808 aaPredicted RBP18.88■□□□□ 0.61
SGCB-201ENST00000381431 LIN9Q5TKA1 542 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 PARD6BQ9BYG5 372 aa18.88■□□□□ 0.61
SGCB-201ENST00000381431 LLGL1Q15334 1064 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 MB21D2Q8IYB1 491 aaPredicted RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 DHTKD1Q96HY7 919 aaPredicted RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 COL4A3BPQ9Y5P4 624 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 SORBS3O60504 671 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 ATP2A2P16615 1042 aaKnown RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 PLCG1P19174 1290 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 NCBP1Q09161 790 aaKnown RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 EXOC3L4Q17RC7 722 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 TTC19Q6DKK2 380 aaPredicted RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 PLA2G4DQ86XP0 818 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 PPM1KQ8N3J5 372 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 LARSQ9P2J5 1176 aaKnown RBP18.87■□□□□ 0.61
SGCB-201ENST00000381431 LEMD3Q9Y2U8 911 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 SARM1Q6SZW1 724 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 SERPINB13Q9UIV8 391 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 MADDQ8WXG6 1647 aa18.87■□□□□ 0.61
SGCB-201ENST00000381431 APBA3O96018 575 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 IFNB1P01574 187 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 INTS8Q75QN2 995 aaKnown RBP18.86■□□□□ 0.61
SGCB-201ENST00000381431 SMC6Q96SB8 1091 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 FKBP3Q00688 224 aaKnown RBP18.86■□□□□ 0.61
SGCB-201ENST00000381431 NLRX1Q86UT6 975 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 MGARPQ8TDB4 240 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
SGCB-201ENST00000381431 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 USP27XA6NNY8 438 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 GRM1Q13255 1194 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 KRT31Q15323 416 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 STK24Q9Y6E0 443 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 MEIS1O00470 390 aa18.86■□□□□ 0.61
SGCB-201ENST00000381431 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
SGCB-201ENST00000381431 PHLPP2Q6ZVD8 1323 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 NMT2O60551 498 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 ZBED4O75132 1171 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 ODR4Q5SWX8 454 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 RESP18Q5W5W9 173 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 NOP56O00567 594 aaKnown RBP18.85■□□□□ 0.61
SGCB-201ENST00000381431 KSR1Q8IVT5 923 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 SLFN12Q8IYM2 578 aa18.85■□□□□ 0.61
SGCB-201ENST00000381431 UNC13BO14795 1591 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 K7ENM7 598 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 FOXN1O15353 648 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 NDUFA10O95299 355 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 DLATP10515 647 aaKnown RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 CCNE1P24864 410 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 MAP3K9P80192 1104 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 FAM102BQ5T8I3 360 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 PPP1R21Q6ZMI0 780 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 AK8Q96MA6 479 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 KRT12Q99456 494 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 CUEDC2Q9H467 287 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 TSPOAP1O95153 1857 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 A6NNZ2 444 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 KRT19P08727 400 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 TUBB8Q3ZCM7 444 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 XKR9Q5GH70 373 aa18.84■□□□□ 0.61
SGCB-201ENST00000381431 GPATCH4Q5T3I0 446 aaKnown RBP18.84■□□□□ 0.61
SGCB-201ENST00000381431 BRINP3Q76B58 766 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms