RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 KRT25Q7Z3Z0 450 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 KRI1Q8N9T8 703 aaKnown RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 TBCKQ8TEA7 893 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 LPAR1Q92633 364 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 RPAP3Q9H6T3 665 aaPredicted RBP9.13□□□□□ -0.95
ERCC8-202ENST00000381118 RRAGCQ9HB90 399 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 FEM1BQ9UK73 627 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 CSADQ9Y600 493 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 SNCAIPQ9Y6H5 919 aa9.13□□□□□ -0.95
ERCC8-202ENST00000381118 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 IREB2P48200 963 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 TRAPPC10P48553 1259 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 MRPL12P52815 198 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 SNW1Q13573 536 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 FAM160B2Q86V87 743 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 GAS2L3Q86XJ1 694 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 FAM177A1Q8N128 213 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 CLMNQ96JQ2 1002 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 SLF1Q9BQI6 1058 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 NUP62CLQ9H1M0 184 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 RANBP17Q9H2T7 1088 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 ELP3Q9H9T3 547 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 FBXO2Q9UK22 296 aaPredicted RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 A0A1W2PQ27 194 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 A0A1W2PQ64 194 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 A0A1W2PQD8 194 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 VWA3AA6NCI4 1184 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 TRAF5O00463 557 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 PFKFB1P16118 471 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
ERCC8-202ENST00000381118 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 CPXCR1Q8N123 301 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 TNMDQ9H2S6 317 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 AFG3L2Q9Y4W6 797 aa9.12□□□□□ -0.95
ERCC8-202ENST00000381118 RLFQ13129 1914 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 KINO60870 393 aaKnown RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CUTAO60888 179 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 PTPREP23469 700 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 HOXA13P31271 388 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CLK2P49760 499 aaKnown RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 ATP2C1P98194 919 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 NEK8Q86SG6 692 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 PRPF38AQ8NAV1 312 aaKnown RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 OTUD5Q96G74 571 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 DDX19AQ9NUU7 478 aaKnown RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 GOLGA6L3A6NEY3 463 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 MEIS2O14770 477 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 OPLAHO14841 1288 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CFBP00751 764 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CMA1P23946 247 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF445P59923 1031 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 FMR1NBQ8N0W7 255 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 ENGASEQ8NFI3 743 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 ERCC4Q92889 916 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 WNK4Q96J92 1243 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 AGBL1Q96MI9 1066 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 HOMER2Q9NSB8 354 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 TMOD4Q9NZQ9 345 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CCPG1Q9ULG6 757 aa9.11□□□□□ -0.95
ERCC8-202ENST00000381118 CTDP1Q9Y5B0 961 aaPredicted RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 SRPRBQ9Y5M8 271 aaKnown RBP9.11□□□□□ -0.95
ERCC8-202ENST00000381118 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 IRF6O14896 467 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 PLA2G6O60733 806 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF202O95125 648 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 TDP2O95551 362 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 BMP15O95972 392 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 SYKP43405 635 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 RESP18Q5W5W9 173 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 LRSAM1Q6UWE0 723 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 ANKRD13AQ8IZ07 590 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 PDILTQ8N807 584 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 TBC1D5Q92609 795 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 TMEM60Q9H2L4 133 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 CLSTN2Q9H4D0 955 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 RAVER2Q9HCJ3 691 aaKnown RBP9.1□□□□□ -0.95
ERCC8-202ENST00000381118 PPP1R9AQ9ULJ8 1098 aa9.1□□□□□ -0.95
ERCC8-202ENST00000381118 DCAF8L1A6NGE4 600 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 SPDYE3A6NKU9 549 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 IL17AQ16552 155 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 FCHSD1Q86WN1 690 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 EPSTI1Q96J88 318 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 UIMC1Q96RL1 719 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
ERCC8-202ENST00000381118 ANO3Q9BYT9 981 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 ZNF536O15090 1300 aa9.09□□□□□ -0.95
ERCC8-202ENST00000381118 RBBP6Q7Z6E9 1792 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms