RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TBCKQ8TEA7 893 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ZNF622Q969S3 477 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 BAG1Q99933 345 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 C6orf50Q9HD87 102 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SERPINB13Q9UIV8 391 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SIPA1L1O43166 1804 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SLX4Q8IY92 1834 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ALDH1B1P30837 517 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 PBX1P40424 430 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 UBA7P41226 1012 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 ZNF658Q5TYW1 1059 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 TTBK2Q6IQ55 1244 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 RASSF8Q8NHQ8 419 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 CPLX3Q8WVH0 158 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 RYDENQ9NUL5 291 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 SUGT1Q9Y2Z0 365 aa8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 V9GYY5 206 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-204ENST00000380176 TRIM49BA6NDI0 452 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PLSCR1O15162 318 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 NRDCO43847 1150 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 SNHG28P0DPA3 235 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 SMARCA1P28370 1054 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 GNA11P29992 359 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 CCT6AP40227 531 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PMS1P54277 932 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 RBL2Q08999 1139 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 TRIM65Q6PJ69 517 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 TOGARAM2Q6ZUX3 1019 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 KRT25Q7Z3Z0 450 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 MASTLQ96GX5 879 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PYM1Q9BRP8 204 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 CCSER1Q9C0I3 900 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 GREB1LQ9C091 1923 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 UNCXA6NJT0 531 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 G3V3G9 751 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 ARHGAP6O43182 974 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 KLRC4O43908 158 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PPP1R11O60927 126 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 OR52Z1P0C646 297 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PDE6BP35913 854 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 SLC16A2P36021 539 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 TECP42680 631 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PAK1Q13153 545 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 MTF1Q14872 753 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 KRT31Q15323 416 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 SOGA3Q5TF21 947 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 NEK8Q86SG6 692 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 KIAA0825Q8IV33 1275 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 REXO1Q8N1G1 1221 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 CCDC12Q8WUD4 166 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 MAP7D2Q96T17 732 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 DNAJC18Q9H819 358 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 RWDD2AQ9UIY3 292 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 PPP2R2CQ9Y2T4 447 aa8.98□□□□□ -0.97
PDLIM5-204ENST00000380176 ZNF646O15015 1829 aaPredicted RBP8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 LAD1O00515 517 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 MPHOSPH10O00566 681 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 TTLL1O95922 423 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 PLCG1P19174 1290 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 PRPHP41219 470 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 CRKP46108 304 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 ATP2B2Q01814 1243 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 TCP10Q12799 353 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 HHIPL2Q6UWX4 724 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 CREBRFQ8IUR6 639 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 ADGRF4Q8IZF3 695 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 LRRN4CLQ8ND94 238 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 TEKT1Q969V4 418 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 VPS16Q9H269 839 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 JMJD4Q9H9V9 463 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 CREBZFQ9NS37 354 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 KBTBD4Q9NVX7 518 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 MYH7BA7E2Y1 1941 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 STX10O60499 249 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 KCTD1Q719H9 257 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 CABP7Q86V35 215 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 IGSF22Q8N9C0 903 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 DESI2Q9BSY9 194 aa8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 MMTAG2Q9BU76 263 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-204ENST00000380176 SOWAHDA6NJG2 315 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 RNF225M0QZC1 329 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 KIF2AO00139 706 aaPredicted RBP8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 SLC37A4O43826 429 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 CLSTN1O94985 981 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 TDP2O95551 362 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 TXKP42681 527 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 ETF1P62495 437 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 ASPRV1Q53RT3 343 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 MTERF4Q7Z6M4 381 aaKnown RBP8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 IRF2BP1Q8IU81 584 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 ADSSL1Q8N142 457 aa8.96□□□□□ -0.97
PDLIM5-204ENST00000380176 DNAI1Q9UI46 699 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms