RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 PDE4DQ08499 809 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
RFC3-201ENST00000380071 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 TEX11Q8IYF3 940 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 CEP95Q96GE4 821 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 PIGSQ96S52 555 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 BIN2Q9UBW5 565 aaPredicted RBP13.63□□□□□ -0.23
RFC3-201ENST00000380071 CAPN11Q9UMQ6 739 aa13.63□□□□□ -0.23
RFC3-201ENST00000380071 SNED1Q8TER0 1413 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 CCDC151A5D8V7 595 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 RHOXF2BP0C7M4 288 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 OAS2P29728 719 aaKnown RBP13.62□□□□□ -0.23
RFC3-201ENST00000380071 NT5C2P49902 561 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 VPS72Q15906 364 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 NEDD1Q8NHV4 660 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 TBCKQ8TEA7 893 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 DNAJC7Q99615 494 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 RHOXF2Q9BQY4 288 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
RFC3-201ENST00000380071 TMEM260Q9NX78 707 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 MAGEC2Q9UBF1 373 aaPredicted RBP13.62□□□□□ -0.23
RFC3-201ENST00000380071 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 USP17L5A8MUK1 530 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 HERVK_113P62684 666 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 BRD3Q15059 726 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 NCAPH2Q6IBW4 605 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 KRT25Q7Z3Z0 450 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 CNBD1Q8NA66 436 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 DHTKD1Q96HY7 919 aaPredicted RBP13.62□□□□□ -0.23
RFC3-201ENST00000380071 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
RFC3-201ENST00000380071 BTAF1O14981 1849 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 ENC1O14682 589 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 UFL1O94874 794 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 SRGNP10124 158 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 DNM2P50570 870 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 ASIC1P78348 528 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 AMPD2Q01433 879 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 TUBB2AQ13885 445 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 BEND6Q5SZJ8 279 aaPredicted RBP13.61□□□□□ -0.23
RFC3-201ENST00000380071 FAM196AQ6ZSG2 479 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 NEK8Q86SG6 692 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 P2RX5Q93086 422 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
RFC3-201ENST00000380071 AK8Q96MA6 479 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 TUBB2BQ9BVA1 445 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 MYO6Q9UM54 1294 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 CCNE1P24864 410 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 GNA11P29992 359 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 CYP2C19P33261 490 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 TXKP42681 527 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 RHBDL3P58872 404 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 TBC1D8BQ0IIM8 1120 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 NOA1Q8NC60 698 aaKnown RBP13.61□□□□□ -0.23
RFC3-201ENST00000380071 MSANTD4Q8NCY6 345 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 C7orf25Q9BPX7 421 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 RAB21Q9UL25 225 aa13.61□□□□□ -0.23
RFC3-201ENST00000380071 FRMPD2Q68DX3 1309 aaPredicted RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 MAP2K7O14733 419 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 GYS2P54840 703 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 ST5P78524 1137 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 SOGA3Q5TF21 947 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 CNOT6LQ96LI5 555 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 TTYH3Q9C0H2 523 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 CUEDC2Q9H467 287 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 DDX60LQ5H9U9 1706 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 MYH1P12882 1939 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 CTAGE8P0CG41 777 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 TRIM21P19474 475 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 WHAMMP3Q1A5X7 153 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 MIIPQ5JXC2 388 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 CTAGE6Q86UF2 777 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 CTAGE4Q8IX94 777 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 KIAA0895Q8NCT3 520 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 COA7Q96BR5 231 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 SLC39A2Q9NP94 309 aa13.6□□□□□ -0.23
RFC3-201ENST00000380071 SEC63Q9UGP8 760 aaKnown RBP13.6□□□□□ -0.23
RFC3-201ENST00000380071 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 H3BQF6 201 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 EDIL3O43854 480 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 IL1R1P14778 569 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms