RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 UBE2Q1Q7Z7E8 422 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 SNRNP27Q8WVK2 155 aaKnown RBP12.98□□□□□ -0.33
NPHS1-202ENST00000378910 LRRC45Q96CN5 670 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 FUCA2Q9BTY2 467 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 UNC13BO14795 1591 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 CFAP221Q4G0U5 840 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 ZMYM1Q5SVZ6 1142 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 NYAP1Q6ZVC0 841 aa12.98□□□□□ -0.33
NPHS1-202ENST00000378910 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
NPHS1-202ENST00000378910 GCP02774 474 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 COG7P83436 770 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 MORC3Q14149 939 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 MUM1Q2TAK8 710 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 MAP7D3Q8IWC1 876 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 BHMTQ93088 406 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 SH3GL1Q99961 368 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 VPS54Q9P1Q0 977 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 FAF1Q9UNN5 650 aaPredicted RBP12.97□□□□□ -0.33
NPHS1-202ENST00000378910 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 LMNB1P20700 586 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 GNAQP50148 359 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 TOGARAM2Q6ZUX3 1019 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 STXBP3O00186 592 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 KRT13P13646 458 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 ZNF76P36508 570 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 MRPL12P52815 198 aaKnown RBP12.97□□□□□ -0.33
NPHS1-202ENST00000378910 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 NCAPG2Q86XI2 1143 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
NPHS1-202ENST00000378910 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 CROCC2H7BZ55 1655 aa12.97□□□□□ -0.33
NPHS1-202ENST00000378910 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 RAB27AP51159 221 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 GUCY2FP51841 1108 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 LCA5Q86VQ0 697 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 GRAMD1CQ8IYS0 662 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 FAM89AQ96GI7 184 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 NDEL1Q9GZM8 345 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 PNMA2Q9UL42 364 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 NEK2P51955 445 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 ARPC4P59998 168 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 RAPGEF1Q13905 1077 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 KCTD16Q68DU8 428 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 BPIFA3Q9BQP9 254 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 CRNKL1Q9BZJ0 848 aaKnown RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 GJB4Q9NTQ9 266 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 RASAL2Q9UJF2 1139 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 KIF1BO60333 1816 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 FAM200BP0CF97 657 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 CETN2P41208 172 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 PPP1R2P41236 205 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 COPB1P53618 953 aaKnown RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 NBPF14Q5TI25 921 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 MAIP1Q8WWC4 291 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 GORASP1Q9BQQ3 440 aa12.96□□□□□ -0.33
NPHS1-202ENST00000378910 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
NPHS1-202ENST00000378910 MYBL1P10243 752 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 ADCY1Q08828 1119 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 NCAPH2Q6IBW4 605 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 BICDL1Q6ZP65 573 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 CMTR1Q8N1G2 835 aaKnown RBP12.96□□□□□ -0.34
NPHS1-202ENST00000378910 PPP1R14BQ96C90 147 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 WDR24Q96S15 920 aa12.96□□□□□ -0.34
NPHS1-202ENST00000378910 MAST3O60307 1309 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 MAGEB6P1A0A0J9YX57 407 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 PDHA1P08559 390 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 NAPAP54920 295 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 CFAP157Q5JU67 520 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 PANX2Q96RD6 677 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 DKK3Q9UBP4 350 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 HYOU1Q9Y4L1 999 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 E9PCH4 1651 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 COBLO75128 1261 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 KCNJ6P48051 423 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 TMED10P49755 219 aaKnown RBP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 SF3A3Q12874 501 aaKnown RBP eCLIP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 SMYD4Q8IYR2 804 aaPredicted RBP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 DCAF5Q96JK2 942 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 FAM207AQ9NSI2 230 aaPredicted RBP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 LARSQ9P2J5 1176 aaKnown RBP12.95□□□□□ -0.34
NPHS1-202ENST00000378910 DNM2P50570 870 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 SMTNP53814 917 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
NPHS1-202ENST00000378910 APOA5Q6Q788 366 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms