RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 FAM76AQ8TAV0 307 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 EXOC4Q96A65 974 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-204ENST00000377475 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 TACC1O75410 805 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 FGFR2P21802 821 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 EIF4A3P38919 411 aaKnown RBP12.88□□□□□ -0.35
SEC23B-204ENST00000377475 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 GFPT1Q06210 699 aaPredicted RBP12.88□□□□□ -0.35
SEC23B-204ENST00000377475 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 MINPP1Q9UNW1 487 aa12.88□□□□□ -0.35
SEC23B-204ENST00000377475 BMP15O95972 392 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 GNGT1P63211 74 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 ALX1Q15699 326 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 DMGDHQ9UI17 866 aaKnown RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 WDR19Q8NEZ3 1342 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 H7C1D1 291 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 PDE2AO00408 941 aaPredicted RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CALM1P0DP23 149 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CALM2P0DP24 149 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CALM3P0DP25 149 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 SLC16A2P36021 539 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 IL6STP40189 918 aaPredicted RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 HAUS4Q9H6D7 363 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 BCS1LQ9Y276 419 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 REXO2Q9Y3B8 237 aaKnown RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 G3V3G9 751 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CALML3P27482 149 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 RPS8P62241 208 aaKnown RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 DCAF8Q5TAQ9 597 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 NAA35Q5VZE5 725 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 APTXQ7Z2E3 356 aaKnown RBP12.87□□□□□ -0.35
SEC23B-204ENST00000377475 GLIS3Q8NEA6 775 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 PIGSQ96S52 555 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 CAPN6Q9Y6Q1 641 aa12.87□□□□□ -0.35
SEC23B-204ENST00000377475 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
SEC23B-204ENST00000377475 HERVK_113P62684 666 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 EHHADHQ08426 723 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 PDCLQ13371 301 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 ITPK1Q13572 414 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 C6orf229H3BNL8 230 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 HGSO14964 777 aaPredicted RBP12.86□□□□□ -0.35
SEC23B-204ENST00000377475 UBE2SQ16763 222 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 TTC31Q49AM3 519 aaPredicted RBP12.86□□□□□ -0.35
SEC23B-204ENST00000377475 SNX29Q8TEQ0 813 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 SETDB2Q96T68 719 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 KDM3BQ7LBC6 1761 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
SEC23B-204ENST00000377475 EIF3CLB5ME19 914 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 SNAP25P60880 206 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 GUCY2DQ02846 1103 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 C8orf74Q6P047 294 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 EIF3CQ99613 913 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 RIOK1Q9BRS2 568 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 RGPD5Q99666 1765 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 GNPATO15228 680 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 MNAT1P51948 309 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 PLS1Q14651 629 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 SRLQ86TD4 932 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 KCND1Q9NSA2 647 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 EPHB6O15197 1021 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 KRT14P02533 472 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 IVLP07476 585 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 DNM2P50570 870 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 MED1Q15648 1581 aaPredicted RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 PDXDC2PQ6P474 469 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 ZNF34Q8IZ26 560 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 UHMK1Q8TAS1 419 aaKnown RBP12.85□□□□□ -0.35
SEC23B-204ENST00000377475 P2RX5Q93086 422 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 PCDHA4Q9UN74 947 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 CDHR2Q9BYE9 1310 aa12.85□□□□□ -0.35
SEC23B-204ENST00000377475 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 NDUFAB1O14561 156 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 CKAP4Q07065 602 aaKnown RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 ZSCAN29Q8IWY8 852 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 NFU1Q9UMS0 254 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 HYOU1Q9Y4L1 999 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms