RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 SLC39A2Q9NP94 309 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 EXOC1Q9NV70 894 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 KBTBD4Q9NVX7 518 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 RAB21Q9UL25 225 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 SMCO2A6NFE2 343 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 GIMAP8Q8ND71 665 aaPredicted RBP20.29■□□□□ 0.84
SF1-203ENST00000377387 CCDC148Q8NFR7 591 aa20.29■□□□□ 0.84
SF1-203ENST00000377387 ZNF185O15231 689 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 RHOBTB3O94955 611 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 TXKP42681 527 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 AMPD2Q01433 879 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 CASP8Q14790 479 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 SPTY2D1Q68D10 685 aaPredicted RBP20.28■□□□□ 0.84
SF1-203ENST00000377387 CNOT6LQ96LI5 555 aaKnown RBP20.28■□□□□ 0.84
SF1-203ENST00000377387 SH3GLB2Q9NR46 395 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 CAPN11Q9UMQ6 739 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 FAN1Q9Y2M0 1017 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 EEF1GP26641 437 aaKnown RBP20.28■□□□□ 0.84
SF1-203ENST00000377387 GNAQP50148 359 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 JAKMIP2Q96AA8 810 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 DRC1Q96MC2 740 aa20.28■□□□□ 0.84
SF1-203ENST00000377387 NOC4LQ9BVI4 516 aaKnown RBP20.28■□□□□ 0.84
SF1-203ENST00000377387 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 TNNT3P45378 269 aaPredicted RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 DYMQ7RTS9 669 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 KRT26Q7Z3Y9 468 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 NYXQ9GZU5 481 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 THAP9Q9H5L6 903 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 TMEM260Q9NX78 707 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 DNM2P50570 870 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 SMCR8Q8TEV9 937 aaPredicted RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 DNAJC7Q99615 494 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 HAUS4Q9H6D7 363 aa20.27■□□□□ 0.84
SF1-203ENST00000377387 NHEJ1Q9H9Q4 299 aaPredicted RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 ZNHIT6Q9NWK9 470 aaKnown RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 PDS5AQ29RF7 1337 aaKnown RBP20.27■□□□□ 0.84
SF1-203ENST00000377387 RASSF10A6NK89 507 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 OR52Z1P0C646 297 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 RASA1P20936 1047 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 KCNB1Q14721 858 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 TXLNBQ8N3L3 684 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 CAGE1Q8TC20 777 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 P2RX5Q93086 422 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 TRIM9Q9C026 710 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 CCSER1Q9C0I3 900 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 MYO1AQ9UBC5 1043 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 SAR1BQ9Y6B6 198 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 LRRIQ3A6PVS8 624 aaPredicted RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 FAM193AP78312 1265 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 TUBB2AQ13885 445 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 GSPT2Q8IYD1 628 aaKnown RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 HNRNPLLQ8WVV9 542 aaKnown RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 TUBB2BQ9BVA1 445 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 JADE2Q9NQC1 790 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 IPO7O95373 1038 aaKnown RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 BAG3O95817 575 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 EIF6P56537 245 aaKnown RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 MRPS25P82663 173 aaKnown RBP20.26■□□□□ 0.83
SF1-203ENST00000377387 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 TBCKQ8TEA7 893 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 PIGSQ96S52 555 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 EYA3Q99504 573 aa20.26■□□□□ 0.83
SF1-203ENST00000377387 SRGNP10124 158 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 TM4SF1P30408 202 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 NONOQ15233 471 aaKnown RBP eCLIP20.25■□□□□ 0.831e-6■■■■■ 28.9
SF1-203ENST00000377387 ZSCAN26Q16670 478 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 FAM207AQ9NSI2 230 aaPredicted RBP20.25■□□□□ 0.83
SF1-203ENST00000377387 NARFQ9UHQ1 456 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 FRMPD2Q68DX3 1309 aaPredicted RBP20.25■□□□□ 0.83
SF1-203ENST00000377387 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
SF1-203ENST00000377387 SOGA3Q5TF21 947 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 PSMB7Q99436 277 aa20.25■□□□□ 0.83
SF1-203ENST00000377387 A0A1W2PQC6 194 aa20.24■□□□□ 0.83
SF1-203ENST00000377387 ARHGEF1Q92888 912 aaKnown RBP20.24■□□□□ 0.83
SF1-203ENST00000377387 CCDC47Q96A33 483 aaKnown RBP20.24■□□□□ 0.83
SF1-203ENST00000377387 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
SF1-203ENST00000377387 EIF3JO75822 258 aaKnown RBP20.24■□□□□ 0.83
SF1-203ENST00000377387 IDEP14735 1019 aa20.24■□□□□ 0.83
SF1-203ENST00000377387 CCNE1P24864 410 aa20.24■□□□□ 0.83
SF1-203ENST00000377387 FLT1P17948 1338 aa20.24■□□□□ 0.83
SF1-203ENST00000377387 KRT86O43790 486 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 CYLC1P35663 651 aaPredicted RBP20.23■□□□□ 0.83
SF1-203ENST00000377387 BTDP43251 543 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 CDK8P49336 464 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 KRT83P78385 493 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 SKIDA1Q1XH10 827 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 HSP90B2PQ58FF3 399 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 WDR66Q8TBY9 1149 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 COA7Q96BR5 231 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 DHTKD1Q96HY7 919 aaPredicted RBP20.23■□□□□ 0.83
SF1-203ENST00000377387 LRWD1Q9UFC0 647 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 SEC63Q9UGP8 760 aaKnown RBP20.23■□□□□ 0.83
SF1-203ENST00000377387 DLEC1Q9Y238 1755 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms