RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 C21orf2O43822 256 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 MMP1P03956 469 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 POLGP54098 1239 aaPredicted RBP19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 CDHR1Q96JP9 859 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 KIF23Q02241 960 aaPredicted RBP19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 C6orf163Q5TEZ5 329 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 SPATA1Q5VX52 437 aa19.74■□□□□ 0.75
CLSTN1-202ENST00000377298 DAPK3O43293 454 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 CYP4A11Q02928 519 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 SUGCTQ9HAC7 445 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 KIAA1024Q9UPX6 916 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 SLC16A2P36021 539 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 GBP6Q6ZN66 633 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 DPP9Q86TI2 863 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 CCDC63Q8NA47 563 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 ZNF577Q9BSK1 485 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 ARHGEF6Q15052 776 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 DIP2CQ9Y2E4 1556 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 TLDC2A0PJX2 215 aa19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 JPH2Q9BR39 696 aaPredicted RBP19.73■□□□□ 0.75
CLSTN1-202ENST00000377298 CYP2D7A0A087X1C5 515 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 RFX1P22670 979 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 SMAP1Q8IYB5 467 aaPredicted RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 DLC1Q96QB1 1528 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 SPOUT1Q5T280 376 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 UTP14CQ5TAP6 766 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 TMEM179Q6ZVK1 233 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 TBCKQ8TEA7 893 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 LARP4BQ92615 738 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 IFIH1Q9BYX4 1025 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 CD209Q9NNX6 404 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 SLC39A2Q9NP94 309 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 E7EVH7 732 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 STK10O94804 968 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 TNNC2P02585 160 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 IREB2P48200 963 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 ARMCX5Q6P1M9 558 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 OGFRQ9NZT2 677 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 PPP2R5AQ15172 486 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 TYW1BQ6NUM6 668 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 USP17L2Q6R6M4 530 aa19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 IPO4Q8TEX9 1081 aaKnown RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 GPR101Q96P66 508 aaPredicted RBP19.72■□□□□ 0.75
CLSTN1-202ENST00000377298 CNGA1P29973 690 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 ADAM9Q13443 819 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 ATRIPQ8WXE1 791 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 RASGRP4Q8TDF6 673 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 CELF1Q92879 486 aaKnown RBP19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 SELENOSQ9BQE4 189 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 RPS6KA1Q15418 735 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 STAG1Q8WVM7 1258 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 ARHGEF40Q8TER5 1519 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 ODR4Q5SWX8 454 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 C1orf112Q9NSG2 853 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 UTP11Q9Y3A2 253 aaKnown RBP19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 NRKQ7Z2Y5 1582 aa19.71■□□□□ 0.75
CLSTN1-202ENST00000377298 CYP2E1P05181 493 aaPredicted RBP19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 ASNSP08243 561 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 LRMPQ12912 555 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 HDXQ7Z353 690 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 PEX26Q7Z412 305 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 PTPRUQ92729 1446 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 CEP104O60308 925 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 TFDP1Q14186 410 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 LRRIQ4A6NIV6 560 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 CRKP46108 304 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 AOC3Q16853 763 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 MYRIPQ8NFW9 859 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 GAP43P17677 238 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 YARSP54577 528 aaKnown RBP19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 ABCC12Q96J65 1359 aa19.7■□□□□ 0.74
CLSTN1-202ENST00000377298 ATF7P17544 494 aaPredicted RBP19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 MAIP1Q8WWC4 291 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 STK17AQ9UEE5 414 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 PCDHA5Q9Y5H7 936 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 RFX7Q2KHR2 1363 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 AGLP35573 1532 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SORBS3O60504 671 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 VPS72Q15906 364 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 UBLCP1Q8WVY7 318 aaPredicted RBP19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 USTQ9Y2C2 406 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SPATA31A6Q5VVP1 1343 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 PNMA6FA0A0J9YX94 578 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SMIM23A6NLE4 172 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 KCNQ2O43526 872 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 MYL1P05976 194 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SYNE4Q8N205 404 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 COA7Q96BR5 231 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 CLTCQ00610 1675 aaKnown RBP19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 PRDX5P30044 214 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 RCOR1Q9UKL0 485 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SH3RF3Q8TEJ3 882 aaPredicted RBP19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 SLC7A3Q8WY07 619 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 FANCLQ9NW38 375 aa19.69■□□□□ 0.74
CLSTN1-202ENST00000377298 IFT20Q8IY31 132 aa19.68■□□□□ 0.74
CLSTN1-202ENST00000377298 ATP5DP30049 168 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms