RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 OCA2Q04671 838 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 FBXL13Q8NEE6 735 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 MED10Q9BTT4 135 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 PALMDQ9NP74 551 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 ZNF233A6NK53 670 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 SYCE1LA8MT33 242 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 ACTN1P12814 892 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 HDAC4P56524 1084 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 MEIS3Q99687 375 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 SLC27A2O14975 620 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 RBM6P78332 1123 aaKnown RBP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 KRT39Q6A163 491 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 DEPTORQ8TB45 409 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 ARHGDIAP52565 204 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 TRAIPQ9BWF2 469 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 FLT4P35916 1363 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 MCF2LO15068 1137 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 BFSP1Q12934 665 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 CHST3Q7LGC8 479 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 PSMB7Q99436 277 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 LCMT1Q9UIC8 334 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 GAS7O60861 476 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 PDE6AP16499 860 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 BABAM1Q9NWV8 329 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 CPP00450 1065 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 EEF1GP26641 437 aaKnown RBP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 NEK2P51955 445 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 CADPS2Q86UW7 1296 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 SUCLA2Q9P2R7 463 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 C6orf118Q5T5N4 469 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 GIPC2Q8TF65 315 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 FAM207AQ9NSI2 230 aaPredicted RBP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 RIMS2Q9UQ26 1411 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 CASP2P42575 452 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 LRWD1Q9UFC0 647 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 MYOCDQ8IZQ8 938 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 MTBPQ96DY7 904 aa9.1□□□□□ -0.95
HSPG2-203ENST00000374695 RRP15Q9Y3B9 282 aaKnown RBP9.1□□□□□ -0.95
HSPG2-203ENST00000374695 NR1H3Q13133 447 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 COPS6Q7L5N1 327 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 KRT82Q9NSB4 513 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 STK17AQ9UEE5 414 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 CDV3Q9UKY7 258 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ARMCX3Q9UH62 379 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 TRIM33Q9UPN9 1127 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 CHEK2O96017 543 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 LMBR1LQ6UX01 489 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ANKRD27Q96NW4 1050 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 OLFM3Q96PB7 478 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 KIF24Q5T7B8 1368 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PPP1R12AO14974 1030 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 EIF3BP55884 814 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 OR9Q1Q8NGQ5 310 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 BICC1Q9H694 974 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 GPCPD1Q9NPB8 672 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 SBNO2Q9Y2G9 1366 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 LAD1O00515 517 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MBD4O95243 580 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 IVNS1ABPQ9Y6Y0 642 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 WAPLQ7Z5K2 1190 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 RUBCNQ92622 972 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ZNF212Q9UDV6 495 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PARD3Q8TEW0 1356 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ARHGAP10A1A4S6 786 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MYL1P05976 194 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 DHX38Q92620 1227 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MAPK8IP1Q9UQF2 711 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 RAPH1Q70E73 1250 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 XPO4Q9C0E2 1151 aaKnown RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 DMRT2Q9Y5R5 561 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PCDH11XQ9BZA7 1347 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PCDH11YQ9BZA8 1340 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 CCDC151A5D8V7 595 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 FAM83GA6ND36 823 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 PDE1BQ01064 536 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 SP4Q02446 784 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 LRRC8BQ6P9F7 803 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 TEX11Q8IYF3 940 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 APOA1P02647 267 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 TEDDM1Q5T9Z0 273 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MIGA1Q8NAN2 632 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 APPBP2Q92624 585 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 MAML3Q96JK9 1138 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 N4BP2L2Q92802 583 aaPredicted RBP9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ADPGKQ9BRR6 497 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 TRIM55Q9BYV6 548 aa9.09□□□□□ -0.95
HSPG2-203ENST00000374695 ZBED4O75132 1171 aa9.08□□□□□ -0.96
HSPG2-203ENST00000374695 CCT5P48643 541 aa9.08□□□□□ -0.96
HSPG2-203ENST00000374695 FAM96AQ9H5X1 160 aa9.08□□□□□ -0.96
HSPG2-203ENST00000374695 NDE1Q9NXR1 346 aa9.08□□□□□ -0.96
HSPG2-203ENST00000374695 URB2Q14146 1524 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms