RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 EXOC1Q9NV70 894 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 HDAC6Q9UBN7 1215 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 GPR75-ASB3A0A0A6YYF3 556 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 TRIM37O94972 964 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 GYS2P54840 703 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 NEK8Q86SG6 692 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 SEPT12Q8IYM1 358 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 REXO1Q8N1G1 1221 aaKnown RBP19.14■□□□□ 0.65
RXRB-201ENST00000374680 NEDD1Q8NHV4 660 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 SH3GLB2Q9NR46 395 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 KCNQ5Q9NR82 932 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
RXRB-201ENST00000374680 G3V3G9 751 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 TUBB4AP04350 444 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 TRIM21P19474 475 aaKnown RBP19.13■□□□□ 0.65
RXRB-201ENST00000374680 SNAP25P60880 206 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 STIM1Q13586 685 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 TBC1D7Q9P0N9 293 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 TTF2Q9UNY4 1162 aaKnown RBP19.13■□□□□ 0.65
RXRB-201ENST00000374680 LUC7L2Q9Y383 392 aaKnown RBP19.13■□□□□ 0.65
RXRB-201ENST00000374680 H7C1D1 291 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 SLC37A4O43826 429 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 CYP27A1Q02318 531 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 TBC1D8BQ0IIM8 1120 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 NCAPH2Q6IBW4 605 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 MB21D1Q8N884 522 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 ZMYND12Q9H0C1 365 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 SUGCTQ9HAC7 445 aa19.13■□□□□ 0.65
RXRB-201ENST00000374680 PDS5AQ29RF7 1337 aaKnown RBP19.13■□□□□ 0.65
RXRB-201ENST00000374680 MYH8P13535 1937 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 SRGAP2O75044 1071 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 SASH3O75995 380 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 PLA2G4AP47712 749 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 DDR1Q08345 913 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 GLIS3Q8NEA6 775 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 RBM17Q96I25 401 aaKnown RBP19.12■□□□□ 0.65
RXRB-201ENST00000374680 TUBGCP2Q9BSJ2 902 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 ZNF287Q9HBT7 754 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 CHMP4BP1P59074 171 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 TRIM9Q9C026 710 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 EPN1Q9Y6I3 576 aaPredicted RBP19.12■□□□□ 0.65
RXRB-201ENST00000374680 NRAPQ86VF7 1730 aa19.12■□□□□ 0.65
RXRB-201ENST00000374680 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 GNA11P29992 359 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
RXRB-201ENST00000374680 SPAG1Q07617 926 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 TSR1Q2NL82 804 aaKnown RBP19.11■□□□□ 0.65
RXRB-201ENST00000374680 CYP26C1Q6V0L0 522 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 TMTC1Q8IUR5 882 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 ANKS1AQ92625 1134 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 CAPZA3Q96KX2 299 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 POLD4Q9HCU8 107 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 KBTBD4Q9NVX7 518 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 SCN7AQ01118 1682 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 CTAGE9A4FU28 777 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 PDHBP11177 359 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 CDK5RAP3Q96JB5 506 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 GJD4Q96KN9 370 aaPredicted RBP19.11■□□□□ 0.65
RXRB-201ENST00000374680 DUSP9Q99956 384 aaKnown RBP19.11■□□□□ 0.65
RXRB-201ENST00000374680 KANSL2Q9H9L4 492 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 USP40Q9NVE5 1235 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 LRWD1Q9UFC0 647 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 DUSP10Q9Y6W6 482 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 LRRC10BA6NIK2 292 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 TAL1P17542 331 aaPredicted RBP19.11■□□□□ 0.65
RXRB-201ENST00000374680 KRT25Q7Z3Z0 450 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 ZFPM1Q8IX07 1006 aa19.11■□□□□ 0.65
RXRB-201ENST00000374680 WNK3Q9BYP7 1800 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 LAMB2P55268 1798 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 CALCRLQ16602 461 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 GOLGA1Q92805 767 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 CNOT6LQ96LI5 555 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 PYM1Q9BRP8 204 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 MMTAG2Q9BU76 263 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 COL22A1Q8NFW1 1626 aaPredicted RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 RBM5P52756 815 aaKnown RBP eCLIP19.1■□□□□ 0.65
RXRB-201ENST00000374680 TTI2Q6NXR4 508 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 SAMD1Q6SPF0 538 aaPredicted RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 CERS5Q8N5B7 392 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 OR8K1Q8NGG5 319 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 NOC4LQ9BVI4 516 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 GTPBP4Q9BZE4 634 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 CCSER1Q9C0I3 900 aa19.1■□□□□ 0.65
RXRB-201ENST00000374680 REXO2Q9Y3B8 237 aaKnown RBP19.1■□□□□ 0.65
RXRB-201ENST00000374680 NDUFA10O95299 355 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 NFIAQ12857 509 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 GIMAP8Q8ND71 665 aaPredicted RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 DRC1Q96MC2 740 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 NAA15Q9BXJ9 866 aaKnown RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 ZC3H12CQ9C0D7 883 aaKnown RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 FAM207AQ9NSI2 230 aaPredicted RBP19.09■□□□□ 0.65
RXRB-201ENST00000374680 TERF2Q15554 542 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 MSL1Q68DK7 614 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 KRT26Q7Z3Y9 468 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 KCNK18Q7Z418 384 aa19.09■□□□□ 0.65
RXRB-201ENST00000374680 CCDC155Q8N6L0 562 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms