RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 RNF40O75150 1001 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 AP1G2O75843 785 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 USP17L8P0C7I0 530 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 BCAS4Q8TDM0 211 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 CCDC87Q9NVE4 849 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 C6orf229H3BNL8 230 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 KIF3CO14782 793 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 HPDP32754 393 aaPredicted RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 EARS2Q5JPH6 523 aaKnown RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 FAM182BQ5T319 152 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 TAX1BP1Q86VP1 789 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 HPS3Q969F9 1004 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 THOC1Q96FV9 657 aaKnown RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 SPAG5Q96R06 1193 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 GPCPD1Q9NPB8 672 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 GUCY2FP51841 1108 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 RAPGEF1Q13905 1077 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 LRRC41Q15345 812 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 TCP11X2Q5H9J9 407 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 PNKPQ96T60 521 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 FAM217BQ9NTX9 383 aaPredicted RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 ACTN4O43707 911 aaKnown RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 BAG3O95817 575 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 TRIM14Q14142 442 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 KCNV1Q6PIU1 500 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 NBPF3Q9H094 633 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 HAUS4Q9H6D7 363 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 GOPCQ9HD26 462 aa13.43□□□□□ -0.26
NCDN-202ENST00000373243 ADD3Q9UEY8 706 aaKnown RBP13.43□□□□□ -0.26
NCDN-202ENST00000373243 ENO4A6NNW6 628 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 H7C1D1 291 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 GYPCP04921 128 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 IRX1P78414 480 aaPredicted RBP13.42□□□□□ -0.26
NCDN-202ENST00000373243 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 POTEDQ86YR6 584 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 KLHL7Q8IXQ5 586 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 STAG1Q8WVM7 1258 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
NCDN-202ENST00000373243 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
NCDN-202ENST00000373243 SETDB2Q96T68 719 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 BICDL2A1A5D9 508 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 WTIPA6NIX2 430 aaPredicted RBP13.42□□□□□ -0.26
NCDN-202ENST00000373243 ZNF185O15231 689 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 KCNJ6P48051 423 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 C8orf74Q6P047 294 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 RAB34Q9BZG1 259 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 TMX4Q9H1E5 349 aaPredicted RBP13.42□□□□□ -0.26
NCDN-202ENST00000373243 C6orf50Q9HD87 102 aa13.42□□□□□ -0.26
NCDN-202ENST00000373243 FOXP2O15409 715 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 CSF1RP07333 972 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 GCFC2P16383 781 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 PRDX5P30044 214 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 GNAQP50148 359 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 NBPF9Q3BBW0 867 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 CEP85LQ5SZL2 805 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 ZBTB10Q96DT7 871 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 PAIP2Q9BPZ3 127 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 KIF9Q9HAQ2 790 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 LRWD1Q9UFC0 647 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 ABL1P00519 1130 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 CRKLP46109 303 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 CCNHP51946 323 aaPredicted RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 SV2BQ7L1I2 683 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 SLC44A5Q8NCS7 719 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 A0A087X0B3 334 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 NDUFAB1O14561 156 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 FGFR1OPO95684 399 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 ATP1A1P05023 1023 aaKnown RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 DNM2P50570 870 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 VAV2P52735 878 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 CFAP58Q5T655 872 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 ZNF658Q5TYW1 1059 aaPredicted RBP13.41□□□□□ -0.26
NCDN-202ENST00000373243 KRT79Q5XKE5 535 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 FAM71BQ8TC56 605 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 TBC1D22AQ8WUA7 517 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 UBXN6Q9BZV1 441 aa13.41□□□□□ -0.26
NCDN-202ENST00000373243 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 PRPF3O43395 683 aaKnown RBP13.4□□□□□ -0.26
NCDN-202ENST00000373243 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
NCDN-202ENST00000373243 SMIM23A6NLE4 172 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 EZRP15311 586 aaKnown RBP13.4□□□□□ -0.26
NCDN-202ENST00000373243 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
NCDN-202ENST00000373243 C8orf37Q96NL8 207 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 TRIM31Q9BZY9 425 aa13.4□□□□□ -0.26
NCDN-202ENST00000373243 KLRF2D3W0D1 207 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 MOCS3O95396 460 aa13.4□□□□□ -0.27
NCDN-202ENST00000373243 CPP00450 1065 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms