RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 GPCPD1Q9NPB8 672 aa23.16■■□□□ 1.3
VEGFA-204ENST00000372064 N4BP3O15049 544 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 SLURP2P0DP57 97 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 G3V3G9 751 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 CCDC175P0C221 793 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 RAD9BQ6WBX8 426 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 IRF2BP1Q8IU81 584 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 CPLX3Q8WVH0 158 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 DESI2Q9BSY9 194 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 PLCG1P19174 1290 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 SHMT1P34896 483 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
VEGFA-204ENST00000372064 APOBEC3HQ6NTF7 200 aaKnown RBP23.15■■□□□ 1.3
VEGFA-204ENST00000372064 SWAP70Q9UH65 585 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 MYH8P13535 1937 aa23.15■■□□□ 1.3
VEGFA-204ENST00000372064 HMGB2P26583 209 aaKnown RBP23.14■■□□□ 1.3
VEGFA-204ENST00000372064 PDE6BP35913 854 aa23.14■■□□□ 1.3
VEGFA-204ENST00000372064 NFIAQ12857 509 aa23.14■■□□□ 1.3
VEGFA-204ENST00000372064 WDR24Q96S15 920 aa23.14■■□□□ 1.3
VEGFA-204ENST00000372064 KCNQ5Q9NR82 932 aa23.14■■□□□ 1.3
VEGFA-204ENST00000372064 ADGRG1Q9Y653 693 aa23.14■■□□□ 1.3
VEGFA-204ENST00000372064 TTLL1O95922 423 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 TRIM14Q14142 442 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 TEKT1Q969V4 418 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 KIFC2Q96AC6 838 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 VPS16Q9H269 839 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 MRPL44Q9H9J2 332 aaKnown RBP23.14■■□□□ 1.29
VEGFA-204ENST00000372064 DBNDD1Q9H9R9 158 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 TAB2Q9NYJ8 693 aa23.14■■□□□ 1.29
VEGFA-204ENST00000372064 MASTLQ96GX5 879 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 GREB1LQ9C091 1923 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-204ENST00000372064 ADAMTSL1Q8N6G6 1762 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 TECP42680 631 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 PMS1P54277 932 aaKnown RBP23.13■■□□□ 1.29
VEGFA-204ENST00000372064 GNG11P61952 73 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 ERCC6LQ2NKX8 1250 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 FBXO38Q6PIJ6 1188 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
VEGFA-204ENST00000372064 TRIM49BA6NDI0 452 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 URI1O94763 535 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-204ENST00000372064 CASQ1P31415 396 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 POTEDQ86YR6 584 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 CREBRFQ8IUR6 639 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 ZNF622Q969S3 477 aaKnown RBP eCLIP23.12■■□□□ 1.293e-13■□□□□ 10.3
VEGFA-204ENST00000372064 C7orf25Q9BPX7 421 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 THAP9Q9H5L6 903 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 APBA3O96018 575 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 TPM1P09493 284 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 STIM1Q13586 685 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 MMTAG2Q9BU76 263 aaKnown RBP23.12■■□□□ 1.29
VEGFA-204ENST00000372064 TRIM9Q9C026 710 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 TMX4Q9H1E5 349 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-204ENST00000372064 EEF1GP26641 437 aaKnown RBP23.12■■□□□ 1.29
VEGFA-204ENST00000372064 ZNF543Q08ER8 600 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 TTBK2Q6IQ55 1244 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 ZFPM1Q8IX07 1006 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 ABHD10Q9NUJ1 306 aa23.12■■□□□ 1.29
VEGFA-204ENST00000372064 DDX41Q9UJV9 622 aaKnown RBP23.12■■□□□ 1.29
VEGFA-204ENST00000372064 PSMA7O14818 248 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 MAP3K9P80192 1104 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 PPP1R18Q6NYC8 613 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 DHTKD1Q96HY7 919 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-204ENST00000372064 OGFRQ9NZT2 677 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 PCDHAC2Q9Y5I4 1007 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-204ENST00000372064 MPHOSPH10O00566 681 aaKnown RBP23.11■■□□□ 1.29
VEGFA-204ENST00000372064 PLSCR1O15162 318 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 H2AFXP16104 143 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-204ENST00000372064 CRKP46108 304 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 ADCY7P51828 1080 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 CBX1P83916 185 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 ATP2B2Q01814 1243 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 TTI2Q6NXR4 508 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 JMJD4Q9H9V9 463 aa23.11■■□□□ 1.29
VEGFA-204ENST00000372064 HLA-DOAP06340 250 aa23.1■■□□□ 1.29
VEGFA-204ENST00000372064 EDIL3O43854 480 aa23.1■■□□□ 1.29
VEGFA-204ENST00000372064 ADGRF4Q8IZF3 695 aa23.1■■□□□ 1.29
VEGFA-204ENST00000372064 NOC3LQ8WTT2 800 aaKnown RBP23.1■■□□□ 1.29
VEGFA-204ENST00000372064 GTPBP4Q9BZE4 634 aaKnown RBP23.1■■□□□ 1.29
VEGFA-204ENST00000372064 SPDYE4A6NLX3 237 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 TADA3O75528 432 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 TXKP42681 527 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 FXR2P51116 673 aaKnown RBP eCLIP23.09■■□□□ 1.296e-18■■■□□ 18.2
VEGFA-204ENST00000372064 CACNB3P54284 484 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 TMTC1Q8IUR5 882 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 COBLL1Q53SF7 1204 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 KIAA0825Q8IV33 1275 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 SMAP1Q8IYB5 467 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-204ENST00000372064 MRFAP1Q9Y605 127 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 A0A1W2PQC6 194 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 LGALS16A8MUM7 142 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 RNF225M0QZC1 329 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-204ENST00000372064 PPP1R11O60927 126 aaPredicted RBP23.09■■□□□ 1.29
VEGFA-204ENST00000372064 SLC16A2P36021 539 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 UBXN1Q04323 297 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 ZNF507Q8TCN5 953 aa23.09■■□□□ 1.29
VEGFA-204ENST00000372064 PNMA6FA0A0J9YX94 578 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms