RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LONP1P36776 959 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 ARMCX3Q9UH62 379 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF148Q9UQR1 794 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 IFRD2Q12894 506 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 TNRQ92752 1358 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 HNRNPCL2B2RXH8 293 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 HNRNPCL1O60812 293 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 ZBBXA8MT70 800 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 PHACTR3Q96KR7 559 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 SCINQ9Y6U3 715 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 LAMC3Q9Y6N6 1575 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 TSTA3Q13630 321 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 CMTR1Q8N1G2 835 aaKnown RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 CABLES1Q8TDN4 633 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 GLG1Q92896 1179 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 SBNO1A3KN83 1393 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 EIF3CLB5ME19 914 aaKnown RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 SERPINI2O75830 405 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 RASSF7Q02833 373 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 TAB3Q8N5C8 712 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 EIF3CQ99613 913 aaKnown RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 H7C1D1 291 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 DTNBO60941 627 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 RPN1P04843 607 aaKnown RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 RAB44Q7Z6P3 723 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 FRMPD2Q68DX3 1309 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 PLXNC1O60486 1568 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 EEF1B2P24534 225 aaKnown RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 LMNB2Q03252 620 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 NRBF2Q96F24 287 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 MIS12Q9H081 205 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
HCFC1-202ENST00000369984 PYGLP06737 847 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 LPIN2Q92539 896 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 PPP1R13BQ96KQ4 1090 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 CCDC138Q96M89 665 aa13.57□□□□□ -0.24
HCFC1-202ENST00000369984 IFNAR2P48551 515 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 FAM178BQ8IXR5 827 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 YWHAGP61981 247 aaKnown RBP eCLIP13.56□□□□□ -0.24
HCFC1-202ENST00000369984 RBM6P78332 1123 aaKnown RBP13.56□□□□□ -0.24
HCFC1-202ENST00000369984 FAM47AQ5JRC9 791 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 HOOK2Q96ED9 719 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 DISC1Q9NRI5 854 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 MAN1A2O60476 641 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 NAA35Q5VZE5 725 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF790Q6PG37 636 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 EFCAB13Q8IY85 973 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 PCYT1AP49585 367 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 EHHADHQ08426 723 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 PPM1KQ8N3J5 372 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 H7C0C1 242 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 TRIM37O94972 964 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 ATP5OP48047 213 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 POLE2P56282 527 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 TCP11Q8WWU5 503 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 ZNF215Q9UL58 517 aaPredicted RBP13.56□□□□□ -0.24
HCFC1-202ENST00000369984 SYNJ2BP-COX16A0A087WUM0 186 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 SLC12A1Q13621 1099 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 NOP9Q86U38 636 aaKnown RBP13.56□□□□□ -0.24
HCFC1-202ENST00000369984 COX16Q9P0S2 106 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
HCFC1-202ENST00000369984 ZMYM6O95789 1325 aa13.56□□□□□ -0.24
HCFC1-202ENST00000369984 EEF1DP29692 281 aaKnown RBP13.55□□□□□ -0.24
HCFC1-202ENST00000369984 G2E3Q7L622 706 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 MAPKAPK5Q8IW41 473 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 GSTA4O15217 222 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 DSCC1Q9BVC3 393 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 TRPA1O75762 1119 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 APBA1Q02410 837 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 NSMFQ6X4W1 530 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 NDUFA8P51970 172 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 PARP10Q53GL7 1025 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-202ENST00000369984 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 MYH10P35580 1976 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 SORBS3O60504 671 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 TFAP4Q01664 338 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 SCOCQ9UIL1 159 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 GNL1P36915 607 aaPredicted RBP13.55□□□□□ -0.24
HCFC1-202ENST00000369984 BLIDQ8IZY5 108 aa13.55□□□□□ -0.24
HCFC1-202ENST00000369984 SRGAP2BP0DMP2 458 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 RNASELQ05823 741 aaKnown RBP13.54□□□□□ -0.24
HCFC1-202ENST00000369984 MAP3K7O43318 606 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 PDE1BQ01064 536 aa13.54□□□□□ -0.24
HCFC1-202ENST00000369984 ZBTB8OSQ8IWT0 167 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms