RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RRP36Q96EU6 259 aaKnown RBP16.02■□□□□ 0.15
CD48-201ENST00000368045 RTFDC1Q9BY42 306 aaPredicted RBP16.02■□□□□ 0.15
CD48-201ENST00000368045 EXOC1Q9NV70 894 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 PUF60Q9UHX1 559 aaKnown RBP16.02■□□□□ 0.15
CD48-201ENST00000368045 MYO6Q9UM54 1294 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 TRIM49BA6NDI0 452 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 PLCG1P19174 1290 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 PMS1P54277 932 aaKnown RBP16.01■□□□□ 0.15
CD48-201ENST00000368045 FAM98CQ17RN3 349 aaKnown RBP16.01■□□□□ 0.15
CD48-201ENST00000368045 FIGNQ5HY92 759 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 HDXQ7Z353 690 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 CCDC170Q8IYT3 715 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 DUSP9Q99956 384 aaKnown RBP16.01■□□□□ 0.15
CD48-201ENST00000368045 TRIM9Q9C026 710 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 ZNHIT6Q9NWK9 470 aaKnown RBP16.01■□□□□ 0.15
CD48-201ENST00000368045 STX8Q9UNK0 236 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
CD48-201ENST00000368045 REXO2Q9Y3B8 237 aaKnown RBP16.01■□□□□ 0.15
CD48-201ENST00000368045 GPR75-ASB3A0A0A6YYF3 556 aa16■□□□□ 0.15
CD48-201ENST00000368045 OAS2P29728 719 aaKnown RBP16■□□□□ 0.15
CD48-201ENST00000368045 CYLC1P35663 651 aaPredicted RBP16■□□□□ 0.15
CD48-201ENST00000368045 NOVP48745 357 aa16■□□□□ 0.15
CD48-201ENST00000368045 KCNQ4P56696 695 aa16■□□□□ 0.15
CD48-201ENST00000368045 ZBED6P86452 979 aa16■□□□□ 0.15
CD48-201ENST00000368045 CDK17Q00537 523 aa16■□□□□ 0.15
CD48-201ENST00000368045 DIXDC1Q155Q3 683 aa16■□□□□ 0.15
CD48-201ENST00000368045 BEND6Q5SZJ8 279 aaPredicted RBP16■□□□□ 0.15
CD48-201ENST00000368045 SLF2Q8IX21 1173 aa16■□□□□ 0.15
CD48-201ENST00000368045 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
CD48-201ENST00000368045 ARHGEF1Q92888 912 aaKnown RBP16■□□□□ 0.15
CD48-201ENST00000368045 EYA3Q99504 573 aa16■□□□□ 0.15
CD48-201ENST00000368045 CHP1Q99653 195 aa16■□□□□ 0.15
CD48-201ENST00000368045 TUBGCP2Q9BSJ2 902 aa16■□□□□ 0.15
CD48-201ENST00000368045 TTYH3Q9C0H2 523 aa16■□□□□ 0.15
CD48-201ENST00000368045 ZKSCAN7Q9P0L1 754 aaPredicted RBP16■□□□□ 0.15
CD48-201ENST00000368045 SEC63Q9UGP8 760 aaKnown RBP16■□□□□ 0.15
CD48-201ENST00000368045 SNED1Q8TER0 1413 aa16■□□□□ 0.15
CD48-201ENST00000368045 NAV1Q8NEY1 1877 aa16■□□□□ 0.15
CD48-201ENST00000368045 A0A1W2PQJ5 194 aa16■□□□□ 0.15
CD48-201ENST00000368045 SMCO2A6NFE2 343 aa16■□□□□ 0.15
CD48-201ENST00000368045 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
CD48-201ENST00000368045 CDK8P49336 464 aa16■□□□□ 0.15
CD48-201ENST00000368045 SLC4A8Q2Y0W8 1093 aa16■□□□□ 0.15
CD48-201ENST00000368045 CNNM4Q6P4Q7 775 aa16■□□□□ 0.15
CD48-201ENST00000368045 MAPKAPK5Q8IW41 473 aa16■□□□□ 0.15
CD48-201ENST00000368045 SLC44A5Q8NCS7 719 aa16■□□□□ 0.15
CD48-201ENST00000368045 FAM163AQ96GL9 167 aaPredicted RBP16■□□□□ 0.15
CD48-201ENST00000368045 ZSWIM4Q9H7M6 989 aa16■□□□□ 0.15
CD48-201ENST00000368045 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
CD48-201ENST00000368045 CCNL1Q9UK58 526 aaPredicted RBP16■□□□□ 0.15
CD48-201ENST00000368045 BTDP43251 543 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 PDE4DQ08499 809 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 TXNRD1Q16881 649 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 WDR59Q6PJI9 974 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 TRAPPC11Q7Z392 1133 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 ZSCAN29Q8IWY8 852 aaPredicted RBP15.99■□□□□ 0.15
CD48-201ENST00000368045 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 STK17AQ9UEE5 414 aa15.99■□□□□ 0.15
CD48-201ENST00000368045 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 PES1O00541 588 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 CCNT1O60563 726 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 IPO7O95373 1038 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 MCM3P25205 808 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 ASIC1P78348 528 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 LETM2Q2VYF4 491 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 WDR93Q6P2C0 686 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 TXLNBQ8N3L3 684 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 ERGIC2Q96RQ1 377 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 SAP30BPQ9UHR5 308 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 ABCB11O95342 1321 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 BAZ2BQ9UIF8 2168 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 TNRC6CQ9HCJ0 1690 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 B4DLN1 442 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 POLR3GO15318 223 aaPredicted RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 KRT86O43790 486 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 IL1R1P14778 569 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 HERVK_113P62684 666 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 TBC1D8BQ0IIM8 1120 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 PAPD7Q5XG87 772 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 CCDC24Q8N4L8 307 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 LRRC15Q8TF66 581 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 CNOT6LQ96LI5 555 aaKnown RBP15.98■□□□□ 0.15
CD48-201ENST00000368045 PNKPQ96T60 521 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 PSD3Q9NYI0 1048 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 GUCA1BQ9UMX6 200 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 L1RE1Q9UN81 338 aa15.98■□□□□ 0.15
CD48-201ENST00000368045 PLIN4Q96Q06 1357 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 PVALEFA0A1B0GWK0 134 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 ANO9A1A5B4 782 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 FGFR1OPO95684 399 aaKnown RBP15.97■□□□□ 0.15
CD48-201ENST00000368045 ABL1P00519 1130 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 GOLGA8HP0CJ92 632 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 TRIM21P19474 475 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms