RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 TAF6LQ9Y6J9 622 aa7.27□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQ45 241 aaPredicted RBP7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQY0 241 aa7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 C2orf71A6NGG8 1288 aa7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 WTIPA6NIX2 430 aaPredicted RBP7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 GALNT18Q6P9A2 607 aa7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 CPNE8Q86YQ8 564 aa7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 FAM84AQ96KN4 292 aa7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 R3HCC1Q9Y3T6 440 aaKnown RBP7.26□□□□□ -1.25
RNU4-28P-201ENST00000364739 SUSD5O60279 629 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 ENDOUP21128 410 aaKnown RBP7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 CYP4F8P98187 520 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 MVKQ03426 396 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 HLA-DQA1Q5Y7H0 255 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 SGPP1Q9BX95 441 aa7.25□□□□□ -1.25
RNU4-28P-201ENST00000364739 MYOCOSA0A1B0GUC4 107 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQ27 194 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQ64 194 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQC6 194 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 A0A1W2PQD8 194 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 NOP56O00567 594 aaKnown RBP7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 KLF4O43474 513 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 ITGAVP06756 1048 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 PNLIPP16233 465 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 SEPHS1P49903 392 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 SCRN1Q12765 414 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 LAPTM5Q13571 262 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 GTF2IRD2BQ6EKJ0 949 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 GTF2IRD2Q86UP8 949 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 FBXO15Q8NCQ5 510 aaPredicted RBP7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 KCNN1Q92952 543 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 MRGPRX3Q96LB0 322 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 TANGO6Q9C0B7 1094 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 ZNF552Q9H707 407 aaPredicted RBP7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 CRTAC1Q9NQ79 661 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 LRP2BPQ9P2M1 347 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 ACSL6Q9UKU0 697 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 BACE2Q9Y5Z0 518 aa7.24□□□□□ -1.25
RNU4-28P-201ENST00000364739 PPP1R11O60927 126 aaPredicted RBP7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 TBC1D8O95759 1140 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 KRT1P04264 644 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 C1QTNF9P0C862 333 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 TACR1P25103 407 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 GRB10Q13322 594 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 SF1Q15637 639 aaKnown RBP7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 RCSD1Q6JBY9 416 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 IRF2BP1Q8IU81 584 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 BHLHE22Q8NFJ8 381 aaPredicted RBP7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 BTN2A2Q8WVV5 523 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 MCOLN1Q9GZU1 580 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 CLEC1BQ9P126 229 aa7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 PPP1R1BQ9UD71 204 aaPredicted RBP7.23□□□□□ -1.25
RNU4-28P-201ENST00000364739 OR14I1A6ND48 311 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 ETV2O00321 342 aaPredicted RBP7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 ZNF143P52747 638 aaPredicted RBP7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 CYP4F3Q08477 520 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 EEF1DP3Q658K8 133 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 TMEM132EQ6IEE7 984 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 CYP2R1Q6VVX0 501 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 TRIM59Q8IWR1 403 aa7.22□□□□□ -1.25
RNU4-28P-201ENST00000364739 STK10O94804 968 aaKnown RBP7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 PLS3P13797 630 aa7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 L1CAMP32004 1257 aa7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 DDR2Q16832 855 aa7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 ZNF227Q86WZ6 799 aa7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 FBLN5Q9UBX5 448 aa7.21□□□□□ -1.26
RNU4-28P-201ENST00000364739 NPHP3-ACAD11A0A0J9YXS1 232 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 THBDP07204 575 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 TMEM253P0C7T8 217 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 NAT2P11245 290 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 ATP2B1P20020 1258 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 ARL4AP40617 200 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 GRIA2P42262 883 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 SRSF3P84103 164 aaKnown RBP7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 RAB33AQ14088 237 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 RAB3GAP1Q15042 981 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 PRSS53Q2L4Q9 553 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 POMZP3Q6PJE2 187 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 ATG14Q6ZNE5 492 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 COPS5Q92905 334 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 RXFP1Q9HBX9 757 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 KLHL14Q9P2G3 628 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 GULP1Q9UBP9 304 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 RWDD3Q9Y3V2 267 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
RNU4-28P-201ENST00000364739 ARNTLO00327 626 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 PAMP19021 973 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 VIPR1P32241 457 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 ECI1P42126 302 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 RAP1GAPP47736 663 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 ERVFRD-1P60508 538 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 BICRALQ6AI39 1079 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 EEPD1Q7L9B9 569 aa7.19□□□□□ -1.26
RNU4-28P-201ENST00000364739 SLC26A8Q96RN1 970 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms