RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 ATP2C1P98194 919 aaPredicted RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 TRAF1Q13077 416 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 CLIC6Q96NY7 704 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 SRPRBQ9Y5M8 271 aaKnown RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 MEIS2O14770 477 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 MCM7P33993 719 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 FAM160A1Q05DH4 1040 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 PTGDRQ13258 359 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 SH3D19Q5HYK7 790 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 MAP1SQ66K74 1059 aaPredicted RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 SHC4Q6S5L8 630 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 MOB2Q70IA6 237 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 ANKRD13AQ8IZ07 590 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 RBM46Q8TBY0 533 aaKnown RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 TBCKQ8TEA7 893 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 DDX19AQ9NUU7 478 aaKnown RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 PPP1R9AQ9ULJ8 1098 aa19.46■□□□□ 0.71
TPM1-205ENST00000357980 COL11A1P12107 1806 aaPredicted RBP19.46■□□□□ 0.7
TPM1-205ENST00000357980 FLOT1O75955 427 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 GRIN1Q05586 938 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 RESP18Q5W5W9 173 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 CCDC174Q6PII3 467 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 CCDC73Q6ZRK6 1079 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 NEK8Q86SG6 692 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 FMR1NBQ8N0W7 255 aaPredicted RBP19.45■□□□□ 0.7
TPM1-205ENST00000357980 C4orf32Q8N8J7 132 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 CLMNQ96JQ2 1002 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 RRAGCQ9HB90 399 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 CLEC11AQ9Y240 323 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 ZNF536O15090 1300 aa19.45■□□□□ 0.7
TPM1-205ENST00000357980 FAM237AA0A1B0GTK4 181 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 A0A1B0GVL5 298 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L15C9J2P7 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L13C9JLJ4 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L11C9JVI0 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L18D6R9N7 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L22D6RA61 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L17D6RBQ6 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L19D6RCP7 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L20D6RJB6 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 NDUFA8P51970 172 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L24Q0WX57 530 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 USP17L6PQ6QN14 398 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 TEX2Q8IWB9 1127 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 ZNF579Q8NAF0 562 aaKnown RBP19.44■□□□□ 0.7
TPM1-205ENST00000357980 SLC38A10Q9HBR0 1119 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 RBBP6Q7Z6E9 1792 aaKnown RBP19.44■□□□□ 0.7
TPM1-205ENST00000357980 SYCE3A1L190 88 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 EDIL3O43854 480 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 ICAM1P05362 532 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 SAMD1Q6SPF0 538 aaPredicted RBP19.44■□□□□ 0.7
TPM1-205ENST00000357980 FERMT2Q96AC1 680 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 HPSEQ9Y251 543 aa19.44■□□□□ 0.7
TPM1-205ENST00000357980 SPDYE5A6NIY4 337 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 PIK3CDO00329 1044 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 TRAF5O00463 557 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 PFKFB1P16118 471 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 PPATQ06203 517 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 TTLL12Q14166 644 aaPredicted RBP19.43■□□□□ 0.7
TPM1-205ENST00000357980 LDHDQ86WU2 507 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 ERO1BQ86YB8 467 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 NUP62CLQ9H1M0 184 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 CLSTN2Q9H4D0 955 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 ELP3Q9H9T3 547 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 TMOD4Q9NZQ9 345 aa19.43■□□□□ 0.7
TPM1-205ENST00000357980 AP3B2Q13367 1082 aa19.42■□□□□ 0.7
TPM1-205ENST00000357980 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
TPM1-205ENST00000357980 LETM2Q2VYF4 491 aa19.42■□□□□ 0.7
TPM1-205ENST00000357980 LDLRAD1Q5T700 205 aa19.42■□□□□ 0.7
TPM1-205ENST00000357980 ARL6IP4Q66PJ3 421 aaKnown RBP19.42■□□□□ 0.7
TPM1-205ENST00000357980 ARMC9Q7Z3E5 817 aa19.42■□□□□ 0.7
TPM1-205ENST00000357980 P2RX7Q99572 595 aaKnown RBP19.42■□□□□ 0.7
TPM1-205ENST00000357980 ABCB11O95342 1321 aa19.42■□□□□ 0.7
TPM1-205ENST00000357980 MCTP2Q6DN12 878 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 ADAMTS5Q9UNA0 930 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 VWA5AO00534 786 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 CCNT1O60563 726 aaKnown RBP19.41■□□□□ 0.7
TPM1-205ENST00000357980 LETM1O95202 739 aaPredicted RBP19.41■□□□□ 0.7
TPM1-205ENST00000357980 FDX1P10109 184 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 FMR1Q06787 632 aaKnown RBP eCLIP19.41■□□□□ 0.7
TPM1-205ENST00000357980 CATSPERGQ6ZRH7 1159 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 RBM43Q6ZSC3 357 aaKnown RBP19.41■□□□□ 0.7
TPM1-205ENST00000357980 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 AGBL1Q96MI9 1066 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 ANO3Q9BYT9 981 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 CSRNP2Q9H175 543 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 TMEM60Q9H2L4 133 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 CCPG1Q9ULG6 757 aa19.41■□□□□ 0.7
TPM1-205ENST00000357980 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
TPM1-205ENST00000357980 LAD1O00515 517 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 IRF6O14896 467 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 IL17AQ16552 155 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 GAS2L3Q86XJ1 694 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 CRYGNQ8WXF5 182 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 ATG4CQ96DT6 458 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 WNK4Q96J92 1243 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 NMRK2Q9NPI5 230 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 KCNH4Q9UQ05 1017 aa19.4■□□□□ 0.7
TPM1-205ENST00000357980 A0A0G2JMZ2 1700 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms