RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 ANGEL2Q5VTE6 544 aaKnown RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 ANKRD7Q92527 254 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 USP25Q9UHP3 1055 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 DOCK1Q14185 1865 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 CLK2P49760 499 aaKnown RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 SNAP25P60880 206 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 USP49Q70CQ1 688 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 EDIL3O43854 480 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 DDNO94850 711 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 ADCY5O95622 1261 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 ASNSP08243 561 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 JAKMIP3Q5VZ66 844 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 APOBEC3FQ8IUX4 373 aaKnown RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 ERCC4Q92889 916 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-201ENST00000356924 RNF181Q9P0P0 153 aa12.62□□□□□ -0.39
ABCD4-201ENST00000356924 GABPB1Q06547 395 aaPredicted RBP12.61□□□□□ -0.39
ABCD4-201ENST00000356924 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
ABCD4-201ENST00000356924 LONRF3Q496Y0 759 aa12.61□□□□□ -0.39
ABCD4-201ENST00000356924 FAM83BQ5T0W9 1011 aa12.61□□□□□ -0.39
ABCD4-201ENST00000356924 SDF4Q9BRK5 362 aa12.61□□□□□ -0.39
ABCD4-201ENST00000356924 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
ABCD4-201ENST00000356924 PRR12Q9ULL5 1215 aa12.61□□□□□ -0.39
ABCD4-201ENST00000356924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-201ENST00000356924 UBE2SQ16763 222 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 ZNF112Q9UJU3 913 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 POLR2AP24928 1970 aaKnown RBP12.6□□□□□ -0.39
ABCD4-201ENST00000356924 CTNND1O60716 968 aaKnown RBP12.6□□□□□ -0.39
ABCD4-201ENST00000356924 ANO6Q4KMQ2 910 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 PRAMEF18Q5VWM3 479 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 KRBA2Q6ZNG9 492 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 EPSTI1Q96J88 318 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 GINM1Q9NU53 330 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 GGA3Q9NZ52 723 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 SSC5DA1L4H1 1573 aa12.6□□□□□ -0.39
ABCD4-201ENST00000356924 A0A087X0B3 334 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ARL6IP4Q66PJ3 421 aaKnown RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 A0A087WWV3 80 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 INPP5BP32019 993 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ELOA2Q8IYF1 753 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 SYMPKQ92797 1274 aaKnown RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 CUL5Q93034 780 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ZBTB9Q96C00 473 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 PCDHA1Q9Y5I3 950 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 PHIPQ8WWQ0 1821 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 POLR2DO15514 142 aaKnown RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 PLA2G6O60733 806 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 TAL1P17542 331 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 STAT2P52630 851 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 MDM2Q00987 491 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 IKQ13123 557 aaPredicted RBP12.59□□□□□ -0.39
ABCD4-201ENST00000356924 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ZNF341Q9BYN7 854 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 PSTPIP2Q9H939 334 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 SERTAD1Q9UHV2 236 aa12.59□□□□□ -0.39
ABCD4-201ENST00000356924 ACTN4O43707 911 aaKnown RBP12.58□□□□□ -0.4
ABCD4-201ENST00000356924 LETM2Q2VYF4 491 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 DCAF15Q66K64 600 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 FOXN1O15353 648 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 MRPL12P52815 198 aaKnown RBP12.58□□□□□ -0.4
ABCD4-201ENST00000356924 STX1AQ16623 288 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 C11orf57Q6ZUT1 292 aaPredicted RBP12.58□□□□□ -0.4
ABCD4-201ENST00000356924 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 FAM200AQ8TCP9 573 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 DNAJC25Q9H1X3 360 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 PPP2R3BQ9Y5P8 575 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 SMCHD1A6NHR9 2005 aa12.58□□□□□ -0.4
ABCD4-201ENST00000356924 CCNT1O60563 726 aaKnown RBP12.57□□□□□ -0.4
ABCD4-201ENST00000356924 TPM3P06753 285 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 CNNM3Q8NE01 707 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
ABCD4-201ENST00000356924 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 FZD1Q9UP38 647 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 PITPNM2Q9BZ72 1349 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 LAD1O00515 517 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 MEIS2O14770 477 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 OPLAHO14841 1288 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 PRPHP41219 470 aa12.57□□□□□ -0.4
ABCD4-201ENST00000356924 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
ABCD4-201ENST00000356924 PNOCQ13519 176 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms