RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 MYH7BA7E2Y1 1941 aa20.75■□□□□ 0.91
SMARCD3-202ENST00000356800 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
SMARCD3-202ENST00000356800 ATG4CQ96DT6 458 aa20.75■□□□□ 0.91
SMARCD3-202ENST00000356800 SLC10A4Q96EP9 437 aa20.75■□□□□ 0.91
SMARCD3-202ENST00000356800 NOL7Q9UMY1 257 aaKnown RBP20.75■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L15C9J2P7 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L13C9JLJ4 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L11C9JVI0 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L18D6R9N7 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L22D6RA61 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L17D6RBQ6 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L19D6RCP7 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L20D6RJB6 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 ICAM1P05362 532 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 DSG3P32926 999 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 MRPL12P52815 198 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L24Q0WX57 530 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 MOGSQ13724 837 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 TPRNQ4KMQ1 711 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 KRT25Q7Z3Z0 450 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 AGBL1Q96MI9 1066 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 ADAMTS5Q9UNA0 930 aa20.74■□□□□ 0.91
SMARCD3-202ENST00000356800 VWA5AO00534 786 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 MEIS2O14770 477 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 SPTLC2O15270 562 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 TRAPPC10P48553 1259 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 COG2Q14746 738 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 INF2Q27J81 1249 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 TTC38Q5R3I4 469 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 USP17L6PQ6QN14 398 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 C2orf69Q8N8R5 385 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 TRAF1Q13077 416 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 GSE1Q14687 1217 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 NONOQ15233 471 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 CAVIN1Q6NZI2 390 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 GADL1Q6ZQY3 521 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 KCNG4Q8TDN1 519 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 P2RX7Q99572 595 aaKnown RBP20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 GZF1Q9H116 711 aaPredicted RBP20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 GLT8D2Q9H1C3 349 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 PCDHA7Q9UN72 937 aa20.73■□□□□ 0.91
SMARCD3-202ENST00000356800 RAVER2Q9HCJ3 691 aaKnown RBP20.72■□□□□ 0.91
SMARCD3-202ENST00000356800 CCPG1Q9ULG6 757 aa20.72■□□□□ 0.91
SMARCD3-202ENST00000356800 A0A0G2JMZ2 1700 aa20.72■□□□□ 0.91
SMARCD3-202ENST00000356800 ABCB11O95342 1321 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 GOLGA6L4A6NEF3 574 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 SPDYE16A6NNV3 312 aaPredicted RBP20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 EDIL3O43854 480 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 ZBED4O75132 1171 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 FDX1P10109 184 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 MARCKSP29966 332 aaPredicted RBP20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 ME1P48163 572 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 ZNF174Q15697 407 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 GPBP1L1Q9HC44 474 aaPredicted RBP20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 MRVI1Q9Y6F6 885 aa20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 RBBP6Q7Z6E9 1792 aaKnown RBP20.71■□□□□ 0.91
SMARCD3-202ENST00000356800 HOXA7P31268 230 aaPredicted RBP20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 AXDND1Q5T1B0 1012 aaPredicted RBP20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 POTEEQ6S8J3 1075 aa20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 TBCKQ8TEA7 893 aa20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 TBC1D5Q92609 795 aa20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 SYAP1Q96A49 352 aaPredicted RBP20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 MRPL11Q9Y3B7 192 aaKnown RBP20.7■□□□□ 0.91
SMARCD3-202ENST00000356800 MYPNQ86TC9 1320 aa20.7■□□□□ 0.9
SMARCD3-202ENST00000356800 KIF3CO14782 793 aa20.7■□□□□ 0.9
SMARCD3-202ENST00000356800 PPP6R2O75170 966 aa20.7■□□□□ 0.9
SMARCD3-202ENST00000356800 TMEM63CQ9P1W3 806 aa20.7■□□□□ 0.9
SMARCD3-202ENST00000356800 PIK3CDO00329 1044 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 HOXA13P31271 388 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 MCM7P33993 719 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 SNAPC2Q13487 334 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 GPAT2Q6NUI2 795 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 CLEC4DQ8WXI8 215 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 HOXC10Q9NYD6 342 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 ZNF214Q9UL59 606 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 AGTPBP1Q9UPW5 1226 aa20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 MORC2Q9Y6X9 1032 aaPredicted RBP20.69■□□□□ 0.9
SMARCD3-202ENST00000356800 PASKQ96RG2 1323 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 TMEM132BQ14DG7 1078 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 ADALQ6DHV7 355 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 NEK8Q86SG6 692 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 C4orf32Q8N8J7 132 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 CEP131Q9UPN4 1083 aa20.68■□□□□ 0.9
SMARCD3-202ENST00000356800 ALAS1P13196 640 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 LIG1P18858 919 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 PTGDRQ13258 359 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 MUM1L1Q5H9M0 696 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 FASTKD5Q7L8L6 764 aaKnown RBP20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 MS4A4AQ96JQ5 239 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 ANO3Q9BYT9 981 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 FBXO2Q9UK22 296 aaPredicted RBP20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 CTDP1Q9Y5B0 961 aaPredicted RBP20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 NFIBO00712 420 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 CFBP00751 764 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 OAZ1P54368 228 aa20.67■□□□□ 0.9
SMARCD3-202ENST00000356800 ATP2C1P98194 919 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms