RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TTC14Q96N46 770 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-204ENST00000356316 PNMA2Q9UL42 364 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 ZNF536O15090 1300 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 ELP1O95163 1332 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 LTBP2Q14767 1821 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 ZNF213O14771 459 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 ICAM1P05362 532 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 ASGR1P07306 291 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 HAND2P61296 217 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 FPGSQ05932 587 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 ANKRD33Q7Z3H0 272 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 ADD3Q9UEY8 706 aaKnown RBP12.55□□□□□ -0.4
CAPN3-204ENST00000356316 MCM3APO60318 1980 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
CAPN3-204ENST00000356316 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 HIP1O00291 1037 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 ZEB2O60315 1214 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 SDSP20132 328 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 SLC16A2P36021 539 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 NOVP48745 357 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 C9orf50Q5SZB4 431 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 ESR2Q92731 530 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 FGD4Q96M96 766 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 UPF3AQ9H1J1 476 aaKnown RBP12.54□□□□□ -0.4
CAPN3-204ENST00000356316 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 A0A0C4DFX4 3053 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 ZMYM6O95789 1325 aa12.54□□□□□ -0.4
CAPN3-204ENST00000356316 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-204ENST00000356316 MYADML2A6NDP7 307 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 ARVCFO00192 962 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 TIMP1P01033 207 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 BTNL9Q6UXG8 535 aa12.53□□□□□ -0.4
CAPN3-204ENST00000356316 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-204ENST00000356316 RANBP17Q9H2T7 1088 aaKnown RBP12.53□□□□□ -0.4
CAPN3-204ENST00000356316 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-204ENST00000356316 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 B4DLN1 442 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 DLL1O00548 723 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-204ENST00000356316 ADCY6O43306 1168 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 CABYRO75952 493 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 ITGB8P26012 769 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 NT5C2P49902 561 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 CDK7P50613 346 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
CAPN3-204ENST00000356316 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
CAPN3-204ENST00000356316 BEX3Q00994 111 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 NUCB1Q02818 461 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 BAATQ14032 418 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-204ENST00000356316 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
CAPN3-204ENST00000356316 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 TLK2Q86UE8 772 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 TMEM199Q8N511 208 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 KATNBL1Q9H079 304 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
CAPN3-204ENST00000356316 IGHDP01880 384 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 PDHBP11177 359 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-204ENST00000356316 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
CAPN3-204ENST00000356316 MFSD5Q6N075 450 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 PLEKHM2Q8IWE5 1019 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 SEZ6LQ9BYH1 1024 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 SEMA6BQ9H3T3 888 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 VTA1Q9NP79 307 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 CTNNA3Q9UI47 895 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 Q9Y3F1 56 aa12.51□□□□□ -0.41
CAPN3-204ENST00000356316 LOC102724159A0A0B4J2E5 919 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-204ENST00000356316 SMPD1P17405 629 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 CALML3P27482 149 aa12.5□□□□□ -0.41
CAPN3-204ENST00000356316 NKX3-2P78367 333 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms