RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 MYH13Q9UKX3 1938 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 PI4KAP2A4QPH2 592 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 CPLX1O14810 134 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 USO1O60763 962 aaKnown RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 LCA5LO95447 670 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 MYBP10242 640 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 ABL2P42684 1182 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 PSMC4P43686 418 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 KIF5AQ12840 1032 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 FIGNQ5HY92 759 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 KRT40Q6A162 431 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 WDR59Q6PJI9 974 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 PI4KAP1Q8N8J0 262 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 RAPGEF5Q92565 580 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 CHMP6Q96FZ7 201 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 OSBPL1AQ9BXW6 950 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 JADE2Q9NQC1 790 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 PA2G4Q9UQ80 394 aaKnown RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 TMEM94Q12767 1356 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 TECPR2O15040 1411 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 A0A1W2PQJ5 194 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 DISP2A7MBM2 1401 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 RNF225M0QZC1 329 aaPredicted RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 ZNF185O15231 689 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 POLR2DO15514 142 aaKnown RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 FOXO3O43524 673 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 DIAPH2O60879 1101 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 SMIM24O75264 130 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 EZH2Q15910 746 aaKnown RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 AMOTQ4VCS5 1084 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 TCP11X2Q5H9J9 407 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 ERMARDQ5T6L9 678 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 LMNTD2Q8IXW0 634 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 MB21D2Q8IYB1 491 aaPredicted RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 NAF1Q96HR8 494 aaKnown RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
CCR9-201ENST00000355983 C9orf78Q9NZ63 289 aaPredicted RBP8.51□□□□□ -1.05
CCR9-201ENST00000355983 BLOC1S6Q9UL45 172 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 ARHGAP23Q9P227 1491 aa8.51□□□□□ -1.05
CCR9-201ENST00000355983 USP54Q70EL1 1684 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 NID2Q14112 1375 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 A0A0G2JS52 829 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 F8W031 263 aaPredicted RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 CES2O00748 559 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 MAFGO15525 162 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 ATP2A2P16615 1042 aaKnown RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 ADRA2BP18089 450 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 HNRNPH3P31942 346 aaKnown RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 SH3BGRP55822 239 aaPredicted RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 DPYDQ12882 1025 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 CUL1Q13616 776 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 RILPL1Q5EBL4 403 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 ANKRD20A2Q5SQ80 823 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 ANKRD20A1Q5TYW2 823 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 ANKRD20A3Q5VUR7 823 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 NUGGCQ68CJ6 796 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 ZNF507Q8TCN5 953 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 SH3TC2Q8TF17 1288 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 TEKT4Q8WW24 435 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 PYM1Q9BRP8 204 aaKnown RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 COPRSQ9NQ92 184 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 PLAAQ9Y263 795 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 GMEB1Q9Y692 573 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 KLF18A0A0U1RQI7 1052 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 TTC26A0AVF1 554 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 GOLGA8BA8MQT2 603 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 LGALS16A8MUM7 142 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 H7C1D1 291 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 PJA2O43164 708 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 PYGLP06737 847 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 GSTA2P09210 222 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 HSPD1P10809 573 aaKnown RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 PYGBP11216 843 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 CFAP221Q4G0U5 840 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 CPLX4Q7Z7G2 160 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 MB21D1Q8N884 522 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 LINS1Q8NG48 757 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 ZNF317Q96PQ6 595 aaPredicted RBP8.5□□□□□ -1.05
CCR9-201ENST00000355983 FAM129AQ9BZQ8 928 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 TTYH3Q9C0H2 523 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 SH2D4AQ9H788 454 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCR9-201ENST00000355983 NWD1Q149M9 1564 aa8.5□□□□□ -1.05
CCR9-201ENST00000355983 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 PRPF3O43395 683 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 IBSPP21815 317 aaPredicted RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 EEF1GP26641 437 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 RXRBP28702 533 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 ABCD1P33897 745 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 SKIV2L2P42285 1042 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 EIF4A1P60842 406 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 ZBED6P86452 979 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 GALNTL6Q49A17 601 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 KSR2Q6VAB6 950 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 RNF10Q8N5U6 811 aaKnown RBP8.49□□□□□ -1.05
CCR9-201ENST00000355983 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
CCR9-201ENST00000355983 IFT74Q96LB3 600 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms