RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 AK8Q96MA6 479 aa20.27■□□□□ 0.83
PDZD3-202ENST00000355547 CASZ1Q86V15 1759 aa20.27■□□□□ 0.83
PDZD3-202ENST00000355547 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
PDZD3-202ENST00000355547 FLT1P17948 1338 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 ONECUT3O60422 494 aaPredicted RBP20.26■□□□□ 0.83
PDZD3-202ENST00000355547 ZSCAN26Q16670 478 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 EHBP1Q8NDI1 1231 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 RASSF8Q8NHQ8 419 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 TUBGCP2Q9BSJ2 902 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 EXOC1Q9NV70 894 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
PDZD3-202ENST00000355547 CCNE1P24864 410 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 CCDC122Q5T0U0 273 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 CCDC170Q8IYT3 715 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 GOLGA5Q8TBA6 731 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 VPS18Q9P253 973 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 SAR1BQ9Y6B6 198 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
PDZD3-202ENST00000355547 B4DLN1 442 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 N4BP1O75113 896 aaKnown RBP20.25■□□□□ 0.83
PDZD3-202ENST00000355547 TBC1D9BQ66K14 1250 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 CSGALNACT2Q8N6G5 542 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 P2RX5Q93086 422 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 RPGRIP1Q96KN7 1286 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 VIPAS39Q9H9C1 493 aa20.25■□□□□ 0.83
PDZD3-202ENST00000355547 EIF3CLB5ME19 914 aaKnown RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 ATP1A1P05023 1023 aaKnown RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 CYLC1P35663 651 aaPredicted RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 LMAN1P49257 510 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 ZBED6P86452 979 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 CDK17Q00537 523 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 DYNLL2Q96FJ2 89 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 EIF3CQ99613 913 aaKnown RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 C7orf25Q9BPX7 421 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 AGPAT5Q9NUQ2 364 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 HDAC6Q9UBN7 1215 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 BICDL2A1A5D9 508 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 KRT86O43790 486 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 FIGNQ5HY92 759 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 HEATR3Q7Z4Q2 680 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 DZIP1Q86YF9 867 aaKnown RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 ZSCAN29Q8IWY8 852 aaPredicted RBP20.24■□□□□ 0.83
PDZD3-202ENST00000355547 FAM71BQ8TC56 605 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 NLRP3Q96P20 1036 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 PLIN2Q99541 437 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 TRIM9Q9C026 710 aa20.24■□□□□ 0.83
PDZD3-202ENST00000355547 TARSL2A2RTX5 802 aaKnown RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 USP17L3A6NCW0 530 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 USP17L4A6NCW7 530 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 PES1O00541 588 aaKnown RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ENC1O14682 589 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 PLCG1P19174 1290 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 MCM3P25205 808 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ACTN2P35609 894 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 PPP1R2P41236 205 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 TBC1D8BQ0IIM8 1120 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 USP17L1Q7RTZ2 530 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 CABP7Q86V35 215 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 PURBQ96QR8 312 aaKnown RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 MMS19Q96T76 1030 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 NYXQ9GZU5 481 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ZMYND12Q9H0C1 365 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 MED4Q9NPJ6 270 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 A0A1W2PQJ5 194 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 LRRIQ3A6PVS8 624 aaPredicted RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ANKRD40Q6AI12 368 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 FAM114A1Q8IWE2 563 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 CCDC47Q96A33 483 aaKnown RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 JAKMIP2Q96AA8 810 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ERGIC2Q96RQ1 377 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 NHEJ1Q9H9Q4 299 aaPredicted RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 MKNK2Q9HBH9 465 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
PDZD3-202ENST00000355547 FAN1Q9Y2M0 1017 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 ZNF831Q5JPB2 1677 aa20.23■□□□□ 0.83
PDZD3-202ENST00000355547 CCDC88AQ3V6T2 1871 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 RCCD1A6NED2 376 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 KCNQ2O43526 872 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 RXRBP28702 533 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 MIIPQ5JXC2 388 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 KIAA1328Q86T90 577 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 LACRTQ9GZZ8 138 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 ACBD3Q9H3P7 528 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 TFR2Q9UP52 801 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 OR52Z1P0C646 297 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 TRIM21P19474 475 aaKnown RBP20.22■□□□□ 0.83
PDZD3-202ENST00000355547 AARSP49588 968 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDZD3-202ENST00000355547 RAD51AP2Q09MP3 1159 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 TXNRD1Q16881 649 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 SLC4A8Q2Y0W8 1093 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 KRT25Q7Z3Z0 450 aa20.22■□□□□ 0.83
PDZD3-202ENST00000355547 CNOT6LQ96LI5 555 aaKnown RBP20.22■□□□□ 0.83
PDZD3-202ENST00000355547 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms