RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR52Z1P0C646 297 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 PDE6CP51160 858 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZBED6P86452 979 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 BFSP1Q12934 665 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 YIPF3Q9GZM5 350 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 PACSIN2Q9UNF0 486 aaPredicted RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 CARMIL3Q8ND23 1372 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 PRDM1O75626 825 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 PDCLQ13371 301 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 LINC00301Q8NCQ3 95 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 LPIN2Q92539 896 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 HAUS7Q99871 368 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 CCDC68Q9H2F9 335 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 SH2D4AQ9H788 454 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 PANK4Q9NVE7 773 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 BTBD18B2RXH4 712 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 IRX1P78414 480 aaPredicted RBP13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 PTPROQ16827 1216 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 CAPN12Q6ZSI9 719 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 CDKL2Q92772 493 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZNF148Q9UQR1 794 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 EXOC3L4Q17RC7 722 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 FANCBQ8NB91 859 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 FMO2Q99518 471 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 TADA3O75528 432 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 ADD1P35611 737 aaKnown RBP13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 GCKRQ14397 625 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 SRLQ86TD4 932 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 LRRC43Q8N309 656 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 RWDD2AQ9UIY3 292 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 ECEL1O95672 775 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZAP70P43403 619 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 KRT80Q6KB66 452 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 PARP9Q8IXQ6 854 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 STOML1Q9UBI4 398 aa13.86□□□□□ -0.19
SYNCRIP-201ENST00000355238 ANKRD65E5RJM6 399 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 MYL1P05976 194 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ADAM9Q13443 819 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 NHEJ1Q9H9Q4 299 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 TEX14Q8IWB6 1497 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ESRRAP11474 423 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 CD19P15391 556 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 HOXA7P31268 230 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 TRAPPC10P48553 1259 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 NRBF2Q96F24 287 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 CFAP73A6NFT4 308 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 BRD2P25440 801 aaKnown RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 TCP11X2Q5H9J9 407 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 PLA2G4DQ86XP0 818 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 NSFL1CQ9UNZ2 370 aaKnown RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 MOCS3O95396 460 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 ATF7P17544 494 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 CAPRIN2Q6IMN6 1127 aaKnown RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 RNF34Q969K3 372 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 MRPL46Q9H2W6 279 aaKnown RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
SYNCRIP-201ENST00000355238 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 LAD1O00515 517 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 CYP2C19P33261 490 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 FAM26FQ5R3K3 315 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 ATP8A2Q9NTI2 1148 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 PTPN22Q9Y2R2 807 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 CHGBP05060 677 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 PPARAQ07869 468 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 PTGDRQ13258 359 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 DRP2Q13474 957 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 SPATA5Q8NB90 893 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 P2RX5Q93086 422 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 TEKT1Q969V4 418 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 SLC39A2Q9NP94 309 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 MED23Q9ULK4 1368 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 TRPA1O75762 1119 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 HOXC9P31274 260 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 INPP1P49441 399 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 BIRC2Q13490 618 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 TMED2Q15363 201 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 OSBPL5Q9H0X9 879 aaPredicted RBP13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 BAG5Q9UL15 447 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 PLAAQ9Y263 795 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 hCG_1642624A0A1W2PR95 340 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZC3H18Q86VM9 953 aaKnown RBP13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 SERPINI1Q99574 410 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 THAP9Q9H5L6 903 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 SAP30BPQ9UHR5 308 aaKnown RBP13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 MFAP3LO75121 409 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 GGCXP38435 758 aa13.84□□□□□ -0.19
SYNCRIP-201ENST00000355238 TECP42680 631 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms