RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ATRNO75882 1429 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 GLI3P10071 1580 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 GMNCA6NCL1 334 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 ZNF233A6NK53 670 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 H7C1D1 291 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 GCOM1H8Y6P7 765 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 RPN1P04843 607 aaKnown RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 PLEKP08567 350 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MYZAPP0CAP1 466 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 IFNAR1P17181 557 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 FECHP22830 423 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 STAT6P42226 847 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 TDRD12Q587J7 1177 aaKnown RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MFSD6Q6ZSS7 791 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 OR2W6PQ8NHA6 318 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 SPATA20Q8TB22 786 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 FAXDC2Q96IV6 333 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MMRN2Q9H8L6 949 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 FAM217BQ9NTX9 383 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 CAPN11Q9UMQ6 739 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 OVOS2A0A0G2JMS6 1433 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 LGALS16A8MUM7 142 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 EPB41P11171 864 aaKnown RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 KRT2P35908 639 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MAGEA1P43355 309 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 DNM2P50570 870 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 PTGDRQ13258 359 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 CFAP221Q4G0U5 840 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 CSGALNACT2Q8N6G5 542 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 IGDCC4Q8TDY8 1250 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 UBLCP1Q8WVY7 318 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 EXOC1Q9NV70 894 aa8.47□□□□□ -1.05
BRCA1-201ENST00000352993 CWC25Q9NXE8 425 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-201ENST00000352993 MYH10P35580 1976 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 ENO4A6NNW6 628 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 GLI1P08151 1106 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 CDC25CP30307 473 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 CCNHP51946 323 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-201ENST00000352993 KCTD19Q17RG1 926 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-201ENST00000352993 CCDC178Q5BJE1 867 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 EGFL6Q8IUX8 553 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 TUBGCP2Q9BSJ2 902 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 NOC4LQ9BVI4 516 aaKnown RBP8.46□□□□□ -1.05
BRCA1-201ENST00000352993 KIF9Q9HAQ2 790 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 FAM207AQ9NSI2 230 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-201ENST00000352993 SPATS2LQ9NUQ6 558 aaKnown RBP8.46□□□□□ -1.05
BRCA1-201ENST00000352993 SLC4A4Q9Y6R1 1079 aa8.46□□□□□ -1.05
BRCA1-201ENST00000352993 LRRC37A3O60309 1634 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 EIF4E1BA6NMX2 242 aaKnown RBP8.46□□□□□ -1.06
BRCA1-201ENST00000352993 PSMA7O14818 248 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 ZKSCAN8Q15776 578 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-201ENST00000352993 TTC38Q5R3I4 469 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF658Q5TYW1 1059 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-201ENST00000352993 GKAP1Q5VSY0 366 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-201ENST00000352993 AP1ARQ63HQ0 302 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 YTHDF3Q7Z739 585 aaKnown RBP8.46□□□□□ -1.06
BRCA1-201ENST00000352993 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 HVCN1Q96D96 273 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 PLCD4Q9BRC7 762 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 PCDHA13Q9Y5I0 950 aa8.46□□□□□ -1.06
BRCA1-201ENST00000352993 HMGB1P1B2RPK0 211 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 DNM1LO00429 736 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 GTPBP6O43824 516 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 IRX1P78414 480 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 RASSF7Q02833 373 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 PLCB4Q15147 1175 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 METTL24Q5JXM2 366 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 TBC1D22AQ8WUA7 517 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 RAPGEF4Q8WZA2 1011 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 FERMT2Q96AC1 680 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 DNAJC7Q99615 494 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 XDHP47989 1333 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF532Q9HCE3 1301 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 LRRC10BA6NIK2 292 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 PHF20L1A8MW92 1017 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 MINDY4BA8MYZ0 360 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 CTNNA1P35221 906 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 SCTRP47872 440 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 ZBED6P86452 979 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 FOXO4P98177 505 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 PTPROQ16827 1216 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 ACCSLQ4AC99 568 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 WLSQ5T9L3 541 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 CCDC170Q8IYT3 715 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 PROCA1Q8NCQ7 364 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 SEC16BQ96JE7 1060 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 GPR108Q9NPR9 543 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 RBM28Q9NW13 759 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 WDR19Q8NEZ3 1342 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 ATXN2Q99700 1313 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 QSER1Q2KHR3 1735 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 COL14A1Q05707 1796 aaKnown RBP8.45□□□□□ -1.06
BRCA1-201ENST00000352993 IFFO1Q0D2I5 559 aa8.45□□□□□ -1.06
BRCA1-201ENST00000352993 DRP2Q13474 957 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms