RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CCDC88AQ3V6T2 1871 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 FCER1AP12319 257 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 ICA1Q05084 483 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 ZNF772Q68DY9 489 aaPredicted RBP15.63■□□□□ 0.09
TRIM4-201ENST00000349062 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 KIF18AQ8NI77 898 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 BAG1Q99933 345 aaPredicted RBP15.63■□□□□ 0.09
TRIM4-201ENST00000349062 IRX2Q9BZI1 471 aaPredicted RBP15.63■□□□□ 0.09
TRIM4-201ENST00000349062 JMJD4Q9H9V9 463 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 LRWD1Q9UFC0 647 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 RGL2O15211 777 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 PAK1Q13153 545 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SLFN13Q68D06 897 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SPECC1LQ69YQ0 1117 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 STK32BQ9NY57 414 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ATF5Q9Y2D1 282 aaPredicted RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 PCDHA1Q9Y5I3 950 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 GAKO14976 1311 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 NID2Q14112 1375 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 NHSQ6T4R5 1651 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SNED1Q8TER0 1413 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ECM29Q5VYK3 1845 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SOWAHDA6NJG2 315 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ZBTB7AO95365 584 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SARSP49591 514 aaKnown RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 RBL2Q08999 1139 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 MCM6Q14566 821 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ERCC6LQ2NKX8 1250 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 KRT25Q7Z3Z0 450 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ENOX1Q8TC92 643 aaKnown RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 SRRTQ9BXP5 876 aaKnown RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 DDX41Q9UJV9 622 aaKnown RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 RREB1Q92766 1687 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 A0A0U1RQJ8 604 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 FAM237AA0A1B0GTK4 181 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 PMS1P54277 932 aaKnown RBP15.62■□□□□ 0.09
TRIM4-201ENST00000349062 FBXO38Q6PIJ6 1188 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 TOGARAM2Q6ZUX3 1019 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 ATRIPQ8WXE1 791 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 NUDT12Q9BQG2 462 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 PSTPIP2Q9H939 334 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 TIAM2Q8IVF5 1701 aa15.62■□□□□ 0.09
TRIM4-201ENST00000349062 PPP1R3GB7ZBB8 358 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 CASP14P31944 242 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 UBXN1Q04323 297 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 SPATA1Q5VX52 437 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 LRRC15Q8TF66 581 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 TRAPPC10P48553 1259 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 GNG11P61952 73 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 PDXDC2PQ6P474 469 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 CCDC174Q6PII3 467 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 SNX29Q8TEQ0 813 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 GSDMAQ96QA5 445 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 DNAJC18Q9H819 358 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 PKD2L1Q9P0L9 805 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 GTPBP6O43824 516 aaPredicted RBP15.61■□□□□ 0.09
TRIM4-201ENST00000349062 PPP1R11O60927 126 aaPredicted RBP15.61■□□□□ 0.09
TRIM4-201ENST00000349062 LONP1P36776 959 aaKnown RBP15.61■□□□□ 0.09
TRIM4-201ENST00000349062 C15orf52Q6ZUT6 534 aaKnown RBP15.61■□□□□ 0.09
TRIM4-201ENST00000349062 PODNQ7Z5L7 613 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 C4orf32Q8N8J7 132 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 CALML4Q96GE6 196 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 ZMYND12Q9H0C1 365 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 IMPACTQ9P2X3 320 aa15.61■□□□□ 0.09
TRIM4-201ENST00000349062 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 SPZ1Q9BXG8 430 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 FAM198AQ9UFP1 575 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 TAF1LQ8IZX4 1826 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 CASZ1Q86V15 1759 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 STAT3P40763 770 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 ZNF543Q08ER8 600 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 ENOX2Q16206 610 aaKnown RBP15.6■□□□□ 0.09
TRIM4-201ENST00000349062 E2F4Q16254 413 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 NAALADL2Q58DX5 795 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 ANKRD20A12PQ8NF67 263 aa15.6■□□□□ 0.09
TRIM4-201ENST00000349062 ECE1P42892 770 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 KRT31Q15323 416 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 ABCB5Q2M3G0 1257 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 QRICH1Q2TAL8 776 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 LRRN4CLQ8ND94 238 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 ZNF397Q8NF99 534 aaPredicted RBP15.59■□□□□ 0.09
TRIM4-201ENST00000349062 FAM163AQ96GL9 167 aaPredicted RBP15.59■□□□□ 0.09
TRIM4-201ENST00000349062 LZTS2Q9BRK4 669 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 KANSL2Q9H9L4 492 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 PCNTO95613 3336 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 MEIS1O00470 390 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 SH3BP5LQ7L8J4 393 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 THSD7AQ9UPZ6 1657 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 KCNJ18B7U540 433 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 KRT18P05783 430 aaKnown RBP15.59■□□□□ 0.09
TRIM4-201ENST00000349062 JAG1P78504 1218 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 SF3B2Q13435 895 aaKnown RBP15.59■□□□□ 0.09
TRIM4-201ENST00000349062 KCNJ12Q14500 433 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 SLC15A2Q16348 729 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 SH3GLB2Q9NR46 395 aa15.59■□□□□ 0.09
TRIM4-201ENST00000349062 F5H6K3 240 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 CHMP2AO43633 222 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 KLRC3Q07444 240 aa15.58■□□□□ 0.09
TRIM4-201ENST00000349062 STK4Q13043 487 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms