RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CPXCR1Q8N123 301 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 TNFRSF25Q93038 417 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 RIC8AQ9NPQ8 531 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 CTDP1Q9Y5B0 961 aaPredicted RBP31.1■■■□□ 2.57
SSBP4-202ENST00000348495 OPLAHO14841 1288 aa31.09■■■□□ 2.57
SSBP4-202ENST00000348495 INHBEP58166 350 aa31.09■■■□□ 2.57
SSBP4-202ENST00000348495 BLIDQ8IZY5 108 aa31.09■■■□□ 2.57
SSBP4-202ENST00000348495 TNPO1Q92973 898 aaKnown RBP31.09■■■□□ 2.57
SSBP4-202ENST00000348495 ADCY7P51828 1080 aa31.08■■■□□ 2.57
SSBP4-202ENST00000348495 NR5A1Q13285 461 aa31.08■■■□□ 2.57
SSBP4-202ENST00000348495 CYP4F22Q6NT55 531 aa31.08■■■□□ 2.57
SSBP4-202ENST00000348495 BRMS1Q9HCU9 246 aa31.08■■■□□ 2.57
SSBP4-202ENST00000348495 DEFB115Q30KQ5 88 aa31.07■■■□□ 2.56
SSBP4-202ENST00000348495 PSTPIP2Q9H939 334 aa31.07■■■□□ 2.56
SSBP4-202ENST00000348495 ZCCHC17Q9NP64 241 aaKnown RBP31.07■■■□□ 2.56
SSBP4-202ENST00000348495 BTBD7Q9P203 1132 aa31.07■■■□□ 2.56
SSBP4-202ENST00000348495 MRPL11Q9Y3B7 192 aaKnown RBP31.07■■■□□ 2.56
SSBP4-202ENST00000348495 IGF2BP3O00425 579 aaKnown RBP eCLIP31.07■■■□□ 2.56
SSBP4-202ENST00000348495 CYP2C8P10632 490 aa31.07■■■□□ 2.56
SSBP4-202ENST00000348495 TEX13BQ9BXU2 312 aa31.07■■■□□ 2.56
SSBP4-202ENST00000348495 CNMDO75829 334 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 BRAPQ7Z569 592 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 NOSTRINQ8IVI9 506 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 BICD2Q8TD16 824 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 GTF3C2Q8WUA4 911 aaPredicted RBP31.06■■■□□ 2.56
SSBP4-202ENST00000348495 CUL5Q93034 780 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 GLT8D2Q9H1C3 349 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 RBPJLQ9UBG7 517 aa31.06■■■□□ 2.56
SSBP4-202ENST00000348495 MRPL12P52815 198 aaKnown RBP31.05■■■□□ 2.56
SSBP4-202ENST00000348495 TEX2Q8IWB9 1127 aa31.05■■■□□ 2.56
SSBP4-202ENST00000348495 CLEC4DQ8WXI8 215 aa31.05■■■□□ 2.56
SSBP4-202ENST00000348495 ZIC5Q96T25 663 aa31.05■■■□□ 2.56
SSBP4-202ENST00000348495 RABGAP1Q9Y3P9 1069 aa31.05■■■□□ 2.56
SSBP4-202ENST00000348495 RIPK3Q9Y572 518 aa31.05■■■□□ 2.56
SSBP4-202ENST00000348495 STAT3P40763 770 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 SNRNP48Q6IEG0 339 aaKnown RBP31.04■■■□□ 2.56
SSBP4-202ENST00000348495 PAXIP1Q6ZW49 1069 aaPredicted RBP31.04■■■□□ 2.56
SSBP4-202ENST00000348495 TXNRD2Q9NNW7 524 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 PCDHA6Q9UN73 950 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 PCDHA8Q9Y5H6 950 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 ALAS1P13196 640 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 TM4SF4P48230 202 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 CLK2P49760 499 aaKnown RBP31.04■■■□□ 2.56
SSBP4-202ENST00000348495 SREBF2Q12772 1141 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 IFNL1Q8IU54 200 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 PARK7Q99497 189 aaKnown RBP31.04■■■□□ 2.56
SSBP4-202ENST00000348495 ATP6V1DQ9Y5K8 247 aa31.04■■■□□ 2.56
SSBP4-202ENST00000348495 MEIS2O14770 477 aa31.03■■■□□ 2.56
SSBP4-202ENST00000348495 PEX10O60683 326 aa31.03■■■□□ 2.56
SSBP4-202ENST00000348495 NOGQ13253 232 aa31.03■■■□□ 2.56
SSBP4-202ENST00000348495 GNL2Q13823 731 aaKnown RBP31.03■■■□□ 2.56
SSBP4-202ENST00000348495 REXO1Q8N1G1 1221 aaKnown RBP31.03■■■□□ 2.56
SSBP4-202ENST00000348495 CAPNS2Q96L46 248 aa31.03■■■□□ 2.56
SSBP4-202ENST00000348495 PIK3CDO00329 1044 aa31.02■■■□□ 2.56
SSBP4-202ENST00000348495 TKFCQ3LXA3 575 aa31.02■■■□□ 2.56
SSBP4-202ENST00000348495 EARS2Q5JPH6 523 aaKnown RBP31.02■■■□□ 2.56
SSBP4-202ENST00000348495 FAM173BQ6P4H8 233 aa31.02■■■□□ 2.56
SSBP4-202ENST00000348495 RASGRP4Q8TDF6 673 aa31.02■■■□□ 2.56
SSBP4-202ENST00000348495 SPATC1LQ9H0A9 340 aa31.02■■■□□ 2.56
SSBP4-202ENST00000348495 GHRHRQ02643 423 aa31.01■■■□□ 2.56
SSBP4-202ENST00000348495 NOM1Q5C9Z4 860 aaKnown RBP31.01■■■□□ 2.56
SSBP4-202ENST00000348495 CLEC17AQ6ZS10 378 aa31.01■■■□□ 2.56
SSBP4-202ENST00000348495 RIOX2Q8IUF8 465 aa31.01■■■□□ 2.56
SSBP4-202ENST00000348495 SMCR8Q8TEV9 937 aaPredicted RBP31.01■■■□□ 2.56
SSBP4-202ENST00000348495 TRERF1Q96PN7 1200 aa31.01■■■□□ 2.56
SSBP4-202ENST00000348495 GCLCP48506 637 aaPredicted RBP31.01■■■□□ 2.55
SSBP4-202ENST00000348495 MUM1L1Q5H9M0 696 aa31.01■■■□□ 2.55
SSBP4-202ENST00000348495 USP17L6PQ6QN14 398 aa31.01■■■□□ 2.55
SSBP4-202ENST00000348495 PAGR1Q9BTK6 254 aa31.01■■■□□ 2.55
SSBP4-202ENST00000348495 BIN2Q9UBW5 565 aaPredicted RBP31.01■■■□□ 2.55
SSBP4-202ENST00000348495 NFIBO00712 420 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 GRM1Q13255 1194 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 PLS1Q14651 629 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 UBE2SQ16763 222 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 HOMER2Q9NSB8 354 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 RNF146Q9NTX7 359 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 MYH15Q9Y2K3 1946 aa31■■■□□ 2.55
SSBP4-202ENST00000348495 FAM205CA6NFA0 338 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 MYSM1Q5VVJ2 828 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 TBC1D5Q92609 795 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 CHAMP1Q96JM3 812 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 TMEM260Q9NX78 707 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 ADGRA2Q96PE1 1338 aa30.99■■■□□ 2.55
SSBP4-202ENST00000348495 Q3C1V9 767 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 RBBP6Q7Z6E9 1792 aaKnown RBP30.98■■■□□ 2.55
SSBP4-202ENST00000348495 HSD17B4P51659 736 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 FOXD4L6Q3SYB3 417 aaPredicted RBP30.98■■■□□ 2.55
SSBP4-202ENST00000348495 JAKMIP3Q5VZ66 844 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 FOXD4L3Q6VB84 417 aaPredicted RBP30.98■■■□□ 2.55
SSBP4-202ENST00000348495 PIK3AP1Q6ZUJ8 805 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 KRT25Q7Z3Z0 450 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 MCF2L2Q86YR7 1114 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 SAMD3Q8N6K7 520 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 MOV10L1Q9BXT6 1211 aaKnown RBP30.98■■■□□ 2.55
SSBP4-202ENST00000348495 MORF4L1Q9UBU8 362 aa30.98■■■□□ 2.55
SSBP4-202ENST00000348495 AOC2O75106 756 aa30.97■■■□□ 2.55
SSBP4-202ENST00000348495 ERVK-9P63128 1117 aa30.97■■■□□ 2.55
SSBP4-202ENST00000348495 ERVK-24P63145 666 aa30.97■■■□□ 2.55
SSBP4-202ENST00000348495 CHST13Q8NET6 341 aa30.97■■■□□ 2.55
SSBP4-202ENST00000348495 GCOM1H8Y6P7 765 aaPredicted RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms