RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 HOXC10Q9NYD6 342 aa8.18□□□□□ -1.1
NUP43-201ENST00000340413 BCRP11274 1271 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 DSG3P32926 999 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 LRSAM1Q6UWE0 723 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 CATSPERGQ6ZRH7 1159 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 TRIML1Q8N9V2 468 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 FBXO40Q9UH90 709 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 PCDHA7Q9UN72 937 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 POTECB2RU33 542 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 TMEM232C9JQI7 657 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 EGFRP00533 1210 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 VEGFAP15692 232 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 SETQ01105 290 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 SLFN12Q8IYM2 578 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 FMR1NBQ8N0W7 255 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 STK11IPQ8N1F8 1099 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 SHCBP1Q8NEM2 672 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 CHST13Q8NET6 341 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 PGBD1Q96JS3 809 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 WRNIP1Q96S55 665 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 BPIFA3Q9BQP9 254 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 LRRC27Q9C0I9 530 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 FIBPO43427 364 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 ZBTB48P10074 688 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 HYIQ5T013 277 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 FOXR2Q6PJQ5 311 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 REM2Q8IYK8 340 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 FAM20AQ96MK3 541 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 AIFM3Q96NN9 605 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 PSTPIP2Q9H939 334 aa8.17□□□□□ -1.1
NUP43-201ENST00000340413 COL11A1P12107 1806 aaPredicted RBP8.17□□□□□ -1.1
NUP43-201ENST00000340413 PPP1R2P41236 205 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 GSE1Q14687 1217 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 EMILIN3Q9NT22 766 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 CLIC4Q9Y696 253 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 THSD7BQ9C0I4 1608 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 PPP1R11O60927 126 aaPredicted RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 FERMT3Q86UX7 667 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 NUP62CLQ9H1M0 184 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 PCDHA1Q9Y5I3 950 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 POLR2AP24928 1970 aaKnown RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 TULP1O00294 542 aaPredicted RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 VCAM1P19320 739 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 TXLNAP40222 546 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 ZSCAN23Q3MJ62 389 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 NT5DC1Q5TFE4 455 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 CCAR1Q8IX12 1150 aaKnown RBP8.16□□□□□ -1.1
NUP43-201ENST00000340413 NEK9Q8TD19 979 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 FEZ1Q99689 392 aa8.16□□□□□ -1.1
NUP43-201ENST00000340413 MYH7BA7E2Y1 1941 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 MAFGO15525 162 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 SLC25A27O95847 323 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 COG2Q14746 738 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 FAM83BQ5T0W9 1011 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 TYW1BQ6NUM6 668 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 RAB11FIP4Q86YS3 637 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 MTMR9Q96QG7 549 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 KDM3AQ9Y4C1 1321 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 GCOM1H8Y6P7 765 aaPredicted RBP8.15□□□□□ -1.1
NUP43-201ENST00000340413 OR52Z1P0C646 297 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 POLR2MP0CAP2 368 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 ME1P48163 572 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 SNW1Q13573 536 aaKnown RBP8.15□□□□□ -1.1
NUP43-201ENST00000340413 COBLL1Q53SF7 1204 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 KCTD1Q719H9 257 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 RDM1Q8NG50 284 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 OXER1Q8TDS5 423 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 FUCA2Q9BTY2 467 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 AGTPBP1Q9UPW5 1226 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 PFASO15067 1338 aa8.15□□□□□ -1.1
NUP43-201ENST00000340413 B4DLN1 442 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 KINO60870 393 aaKnown RBP8.15□□□□□ -1.11
NUP43-201ENST00000340413 MRE11P49959 708 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 TMEM266Q2M3C6 531 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 ANO3Q9BYT9 981 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 STK17AQ9UEE5 414 aa8.15□□□□□ -1.11
NUP43-201ENST00000340413 MEIS2O14770 477 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 GOLGA8HP0CJ92 632 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 OSBPP22059 807 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 GUCY1B3Q02153 619 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 SLC4A8Q2Y0W8 1093 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 TTBK2Q6IQ55 1244 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 IGSF22Q8N9C0 903 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 TUBE1Q9UJT0 475 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 ZNF536O15090 1300 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 ECE1P42892 770 aa8.14□□□□□ -1.11
NUP43-201ENST00000340413 NR5A1Q13285 461 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms