RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 USP17L13C9JLJ4 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L11C9JVI0 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L18D6R9N7 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L22D6RA61 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L17D6RBQ6 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L19D6RCP7 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L20D6RJB6 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 PTPRAP18433 802 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L24Q0WX57 530 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 LONRF3Q496Y0 759 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 ARL6IP4Q66PJ3 421 aaKnown RBP24.13■■□□□ 1.45
VRK2-201ENST00000340157 USP17L6PQ6QN14 398 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 CHURC1Q8WUH1 139 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 KIFC2Q96AC6 838 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 P2RX7Q99572 595 aaKnown RBP24.13■■□□□ 1.45
VRK2-201ENST00000340157 SDF4Q9BRK5 362 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 FEM1BQ9UK73 627 aa24.13■■□□□ 1.45
VRK2-201ENST00000340157 A0A087X0B3 334 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 MEIS2O14770 477 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 MTMR2Q13614 643 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 DPY19L2Q6NUT2 758 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 FAM160B2Q86V87 743 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 LPAR1Q92633 364 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 WDR18Q9BV38 432 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 EMILIN3Q9NT22 766 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 FAM13BQ9NYF5 915 aa24.12■■□□□ 1.45
VRK2-201ENST00000340157 SCN4AP35499 1836 aa24.11■■□□□ 1.45
VRK2-201ENST00000340157 CCNT1O60563 726 aaKnown RBP24.11■■□□□ 1.45
VRK2-201ENST00000340157 SUPT20HL1Q3ZLR7 823 aa24.11■■□□□ 1.45
VRK2-201ENST00000340157 SYMPKQ92797 1274 aaKnown RBP24.11■■□□□ 1.45
VRK2-201ENST00000340157 WDR90Q96KV7 1748 aa24.11■■□□□ 1.45
VRK2-201ENST00000340157 WDR46O15213 610 aaKnown RBP24.11■■□□□ 1.45
VRK2-201ENST00000340157 SPP2Q13103 211 aa24.11■■□□□ 1.45
VRK2-201ENST00000340157 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.11■■□□□ 1.45
VRK2-201ENST00000340157 DCPSQ96C86 337 aaKnown RBP24.11■■□□□ 1.45
VRK2-201ENST00000340157 RLFQ13129 1914 aa24.1■■□□□ 1.45
VRK2-201ENST00000340157 POLR2DO15514 142 aaKnown RBP24.1■■□□□ 1.45
VRK2-201ENST00000340157 USP2O75604 605 aaPredicted RBP24.1■■□□□ 1.45
VRK2-201ENST00000340157 KRBA2Q6ZNG9 492 aa24.1■■□□□ 1.45
VRK2-201ENST00000340157 ZC3H4Q9UPT8 1303 aaKnown RBP24.09■■□□□ 1.45
VRK2-201ENST00000340157 A0A087WWV3 80 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 GLTPD2A6NH11 291 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 PRKG1Q13976 671 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 NOL9Q5SY16 702 aaKnown RBP24.09■■□□□ 1.45
VRK2-201ENST00000340157 CCDC174Q6PII3 467 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 GLT8D2Q9H1C3 349 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 PICK1Q9NRD5 415 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 PTPRFP10586 1907 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 VCAM1P19320 739 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 EPHX2P34913 555 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 SASS6Q6UVJ0 657 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 SULF1Q8IWU6 871 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 KIAA1468Q9P260 1216 aa24.09■■□□□ 1.45
VRK2-201ENST00000340157 ACTN4O43707 911 aaKnown RBP24.08■■□□□ 1.45
VRK2-201ENST00000340157 NEMFO60524 1076 aa24.08■■□□□ 1.45
VRK2-201ENST00000340157 TDP2O95551 362 aa24.08■■□□□ 1.45
VRK2-201ENST00000340157 BACE1P56817 501 aa24.08■■□□□ 1.45
VRK2-201ENST00000340157 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.45
VRK2-201ENST00000340157 PDILTQ8N807 584 aa24.08■■□□□ 1.45
VRK2-201ENST00000340157 ZNF280CQ8ND82 737 aa24.08■■□□□ 1.45
VRK2-201ENST00000340157 LAD1O00515 517 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 FOXN1O15353 648 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 SLC37A4O43826 429 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 PRPHP41219 470 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 ANO6Q4KMQ2 910 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 SAMD1Q6SPF0 538 aaPredicted RBP24.07■■□□□ 1.44
VRK2-201ENST00000340157 KRT26Q7Z3Y9 468 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 POTEDQ86YR6 584 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 SERTAD1Q9UHV2 236 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 POTECB2RU33 542 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 GRIN3BO60391 1043 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 OR52Z1P0C646 297 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 MDM2Q00987 491 aaPredicted RBP24.07■■□□□ 1.44
VRK2-201ENST00000340157 ORC2Q13416 577 aaPredicted RBP24.07■■□□□ 1.44
VRK2-201ENST00000340157 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.07■■□□□ 1.44
VRK2-201ENST00000340157 ANO3Q9BYT9 981 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 ZHX2Q9Y6X8 837 aa24.07■■□□□ 1.44
VRK2-201ENST00000340157 ZNF536O15090 1300 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 LONP1P36776 959 aaKnown RBP24.06■■□□□ 1.44
VRK2-201ENST00000340157 DTHD1Q6ZMT9 781 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 CNNM3Q8NE01 707 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 CRYGNQ8WXF5 182 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 SLF1Q9BQI6 1058 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 AS3MTQ9HBK9 375 aa24.06■■□□□ 1.44
VRK2-201ENST00000340157 COL11A1P12107 1806 aaPredicted RBP24.05■■□□□ 1.44
VRK2-201ENST00000340157 USP14P54578 494 aa24.05■■□□□ 1.44
VRK2-201ENST00000340157 PNOCQ13519 176 aa24.05■■□□□ 1.44
VRK2-201ENST00000340157 ELOA2Q8IYF1 753 aaPredicted RBP24.05■■□□□ 1.44
VRK2-201ENST00000340157 MTMR9Q96QG7 549 aa24.05■■□□□ 1.44
VRK2-201ENST00000340157 SNCAIPQ9Y6H5 919 aa24.05■■□□□ 1.44
VRK2-201ENST00000340157 CDC25AP30304 524 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 AP3B2Q13367 1082 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 PRPF38AQ8NAV1 312 aaKnown RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 RPAP3Q9H6T3 665 aaPredicted RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 PP2D1A8MPX8 630 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 PIK3CDO00329 1044 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 HOXA13P31271 388 aaPredicted RBP24.04■■□□□ 1.44
VRK2-201ENST00000340157 VGLL4Q14135 290 aa24.04■■□□□ 1.44
VRK2-201ENST00000340157 PPP4R3AQ6IN85 833 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms