RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MTMR10Q9NXD2 777 aa12.57□□□□□ -0.4
CAPN3-202ENST00000337571 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
CAPN3-202ENST00000337571 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
CAPN3-202ENST00000337571 STXBP5LQ9Y2K9 1186 aa12.57□□□□□ -0.4
CAPN3-202ENST00000337571 MROH7Q68CQ1 1323 aa12.57□□□□□ -0.4
CAPN3-202ENST00000337571 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 FOXP2O15409 715 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-202ENST00000337571 FGRP09769 529 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
CAPN3-202ENST00000337571 GJA9P57773 515 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 SNAP25P60880 206 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 CNTN2Q02246 1040 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-202ENST00000337571 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-202ENST00000337571 FAM133AQ8N9E0 248 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 TTC14Q96N46 770 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 AP5M1Q9H0R1 490 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 RNF41Q9H4P4 317 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-202ENST00000337571 PNMA2Q9UL42 364 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 ZNF536O15090 1300 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 ELP1O95163 1332 aa12.56□□□□□ -0.4
CAPN3-202ENST00000337571 LTBP2Q14767 1821 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 ZNF213O14771 459 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 KIAA0355O15063 1070 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 ICAM1P05362 532 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 ASGR1P07306 291 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 HAND2P61296 217 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 FPGSQ05932 587 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 NSMFQ6X4W1 530 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 ANKRD33Q7Z3H0 272 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 TMEM47Q9BQJ4 181 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 TCP11L1Q9NUJ3 509 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 ADD3Q9UEY8 706 aaKnown RBP12.55□□□□□ -0.4
CAPN3-202ENST00000337571 MCM3APO60318 1980 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 CCDC171Q6TFL3 1326 aa12.55□□□□□ -0.4
CAPN3-202ENST00000337571 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 HIP1O00291 1037 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 ZEB2O60315 1214 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 SDSP20132 328 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 CST5P28325 142 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 SLC16A2P36021 539 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 NOVP48745 357 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 FAAP100Q0VG06 881 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 C9orf50Q5SZB4 431 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 SYDE2Q5VT97 1194 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 CCSAPQ6IQ19 270 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 ESR2Q92731 530 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 FGD4Q96M96 766 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 UPF3AQ9H1J1 476 aaKnown RBP12.54□□□□□ -0.4
CAPN3-202ENST00000337571 DIAPH3Q9NSV4 1193 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 A0A0C4DFX4 3053 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 ZMYM6O95789 1325 aa12.54□□□□□ -0.4
CAPN3-202ENST00000337571 A0A0U1RQG5 324 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-202ENST00000337571 MYADML2A6NDP7 307 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 ARVCFO00192 962 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 TIMP1P01033 207 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 CCDC178Q5BJE1 867 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 MUM1L1Q5H9M0 696 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 TTBK2Q6IQ55 1244 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 BTNL9Q6UXG8 535 aa12.53□□□□□ -0.4
CAPN3-202ENST00000337571 ZNF589Q86UQ0 364 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-202ENST00000337571 RANBP17Q9H2T7 1088 aaKnown RBP12.53□□□□□ -0.4
CAPN3-202ENST00000337571 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-202ENST00000337571 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 B4DLN1 442 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 DLL1O00548 723 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 DYNC1LI2O43237 492 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-202ENST00000337571 ADCY6O43306 1168 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 CABYRO75952 493 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 ITGB8P26012 769 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 NT5C2P49902 561 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 CDK7P50613 346 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 MRPL12P52815 198 aaKnown RBP12.52□□□□□ -0.41
CAPN3-202ENST00000337571 SMAD3P84022 425 aaKnown RBP12.52□□□□□ -0.41
CAPN3-202ENST00000337571 BEX3Q00994 111 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 NUCB1Q02818 461 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 BAATQ14032 418 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-202ENST00000337571 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
CAPN3-202ENST00000337571 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 TLK2Q86UE8 772 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 TMEM199Q8N511 208 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 KATNBL1Q9H079 304 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.41
CAPN3-202ENST00000337571 IGHDP01880 384 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms