RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 NLGN1Q8N2Q7 840 aa5.68□□□□□ -1.5
CBX3P1-201ENST00000325243 BRF1Q92994 677 aa5.68□□□□□ -1.5
CBX3P1-201ENST00000325243 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
CBX3P1-201ENST00000325243 NT5C1AQ9BXI3 368 aa5.68□□□□□ -1.5
CBX3P1-201ENST00000325243 SUSD2Q9UGT4 822 aa5.68□□□□□ -1.5
CBX3P1-201ENST00000325243 TACR1P25103 407 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 PMS1P54277 932 aaKnown RBP5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 ZNF445P59923 1031 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 FOXO4P98177 505 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 TARBP2Q15633 366 aaKnown RBP5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 SPATS1Q496A3 300 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 AXDND1Q5T1B0 1012 aaPredicted RBP5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 INTS3Q68E01 1043 aaKnown RBP5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 LIPIQ6XZB0 460 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 DHRS1Q96LJ7 313 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 PDLIM7Q9NR12 457 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 ZNRF3Q9ULT6 936 aa5.67□□□□□ -1.5
CBX3P1-201ENST00000325243 MC3RP41968 323 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 HTRA3P83110 453 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 PRR5P85299 388 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 DLX2Q07687 328 aaPredicted RBP5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 ZXDCQ2QGD7 858 aaPredicted RBP5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 ZFYVE27Q5T4F4 411 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 CYP2R1Q6VVX0 501 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 ZNF526Q8TF50 670 aaPredicted RBP5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 FCRL3Q96P31 734 aaPredicted RBP5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 GP6Q9HCN6 339 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
CBX3P1-201ENST00000325243 F8W031 263 aaPredicted RBP5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 IFNGR1P15260 489 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 ERCC3P19447 782 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 ZYXQ15942 572 aaKnown RBP5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 NOL9Q5SY16 702 aaKnown RBP5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 HHIPL2Q6UWX4 724 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 FERMT3Q86UX7 667 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 FIBCD1Q8N539 461 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 FAM86C1Q9NVL1 165 aa5.65□□□□□ -1.5
CBX3P1-201ENST00000325243 A0A1W2PQJ5 194 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 ASGR2P07307 311 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 INSRRP14616 1297 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 KIAA0825Q8IV33 1275 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 PTCHD1Q96NR3 888 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 SPON2Q9BUD6 331 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 RNF38Q9H0F5 515 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 BCAS3Q9H6U6 928 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 RXFP1Q9HBX9 757 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 USP40Q9NVE5 1235 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 ZNF451Q9Y4E5 1061 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 FHOD1Q9Y613 1164 aa5.64□□□□□ -1.51
CBX3P1-201ENST00000325243 SH3D21A4FU49 640 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 TP53P04637 393 aaPredicted RBP5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 CD3EP07766 207 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 CD247P20963 164 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 CORO7P57737 925 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 TAB3Q8N5C8 712 aaPredicted RBP5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 NLGN2Q8NFZ4 835 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 SMARCC1Q92922 1105 aaPredicted RBP5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 FBLN5Q9UBX5 448 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 FAN1Q9Y2M0 1017 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 DUSP10Q9Y6W6 482 aa5.63□□□□□ -1.51
CBX3P1-201ENST00000325243 GLI4P10075 376 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 NCAM1P13591 858 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 PMLP29590 882 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 L1CAMP32004 1257 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 NOP2P46087 812 aaKnown RBP5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 CCDC27Q2M243 656 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 LDLRAD1Q5T700 205 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 RUFY4Q6ZNE9 571 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 GIPC2Q8TF65 315 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 ZDHHC15Q96MV8 337 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 TM9SF2Q99805 663 aa5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 DBR1Q9UK59 544 aaKnown RBP5.62□□□□□ -1.51
CBX3P1-201ENST00000325243 K7ESM1 405 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 CBFA2T2O43439 604 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 NOBOXO60393 691 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 TBC1D8O95759 1140 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 IMPDH2P12268 514 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 B3GNT8Q7Z7M8 397 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 DDX1Q92499 740 aaKnown RBP5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 ALG3Q92685 438 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 NOX5Q96PH1 765 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 MCMBPQ9BTE3 642 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 BCL2L13Q9BXK5 485 aa5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 SF3B6Q9Y3B4 125 aaKnown RBP5.61□□□□□ -1.51
CBX3P1-201ENST00000325243 ITGA4P13612 1032 aa5.6□□□□□ -1.51
CBX3P1-201ENST00000325243 PDIA4P13667 645 aaKnown RBP5.6□□□□□ -1.51
CBX3P1-201ENST00000325243 CNR2P34972 360 aa5.6□□□□□ -1.51
CBX3P1-201ENST00000325243 POU4F1Q01851 419 aa5.6□□□□□ -1.51
CBX3P1-201ENST00000325243 CARFQ8N187 725 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms