RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 HOMER2Q9NSB8 354 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
RPP40-201ENST00000319533 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
RPP40-201ENST00000319533 CABYRO75952 493 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 FGRP09769 529 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 TNFAIP2Q03169 654 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 GRIN2CQ14957 1233 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 CCDC174Q6PII3 467 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 TRERF1Q96PN7 1200 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 SEZ6LQ9BYH1 1024 aa16.86■□□□□ 0.29
RPP40-201ENST00000319533 LRRC37A2A6NM11 1700 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 TLR3O15455 904 aaKnown RBP16.85■□□□□ 0.29
RPP40-201ENST00000319533 MX1P20591 662 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 CCDC129Q6ZRS4 1044 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 MORC4Q8TE76 937 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 VTI1AQ96AJ9 217 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 PRR12Q9ULL5 1215 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 Q9Y3F1 56 aa16.85■□□□□ 0.29
RPP40-201ENST00000319533 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 ORC4O43929 436 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 ALAS1P13196 640 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 CSF2RAP15509 400 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 BEX3Q00994 111 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 ALX1Q15699 326 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 IQSEC1Q6DN90 963 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 TAPT1Q6NXT6 567 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 KCTD1Q719H9 257 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 TIFAQ96CG3 184 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 ZNF576Q9H609 170 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 INCENPQ9NQS7 918 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 TTC28Q96AY4 2481 aa16.84■□□□□ 0.29
RPP40-201ENST00000319533 GRIN2DO15399 1336 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 NMT2O60551 498 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 SMPD1P17405 629 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 IKQ13123 557 aaPredicted RBP16.83■□□□□ 0.28
RPP40-201ENST00000319533 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
RPP40-201ENST00000319533 MUM1L1Q5H9M0 696 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 PSRC1Q6PGN9 363 aaPredicted RBP16.83■□□□□ 0.28
RPP40-201ENST00000319533 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 TLK2Q86UE8 772 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
RPP40-201ENST00000319533 IL23AQ9NPF7 189 aa16.83■□□□□ 0.28
RPP40-201ENST00000319533 ICAM1P05362 532 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 ITGA7Q13683 1181 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 VPS53Q5VIR6 699 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 ZNF365Q70YC5 407 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 TICAM2Q86XR7 235 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 DCAF4Q8WV16 495 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 HERVK_113Q902F9 699 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 PBX4Q9BYU1 374 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 PPP1R12CQ9BZL4 782 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 AP5M1Q9H0R1 490 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 ISY1Q9ULR0 285 aaKnown RBP16.82■□□□□ 0.28
RPP40-201ENST00000319533 LCTP09848 1927 aa16.82■□□□□ 0.28
RPP40-201ENST00000319533 LOC102724159A0A0B4J2E5 919 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 DYNC1LI2O43237 492 aaPredicted RBP16.81■□□□□ 0.28
RPP40-201ENST00000319533 ZEB2O60315 1214 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 CYP2C18P33260 490 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 SNAP25P60880 206 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 PWP2Q15269 919 aaKnown RBP16.81■□□□□ 0.28
RPP40-201ENST00000319533 NOL8Q76FK4 1167 aaKnown RBP16.81■□□□□ 0.28
RPP40-201ENST00000319533 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 HELLSQ9NRZ9 838 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 TCP11L1Q9NUJ3 509 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
RPP40-201ENST00000319533 CHD9Q3L8U1 2897 aa16.81■□□□□ 0.28
RPP40-201ENST00000319533 GRXCR1A8MXD5 290 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
RPP40-201ENST00000319533 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
RPP40-201ENST00000319533 ACRP10323 421 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 PTGS1P23219 599 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 PBX2P40425 430 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 USP38Q8NB14 1042 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 CHMP4CQ96CF2 233 aa16.8■□□□□ 0.28
RPP40-201ENST00000319533 ZMYM6O95789 1325 aa16.79■□□□□ 0.28
RPP40-201ENST00000319533 RBM47A0AV96 593 aaKnown RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 MKRN4PQ13434 485 aaPredicted RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
RPP40-201ENST00000319533 TMEM63BQ5T3F8 832 aa16.79■□□□□ 0.28
RPP40-201ENST00000319533 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
RPP40-201ENST00000319533 FBXO16Q8IX29 292 aaPredicted RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 NOC4LQ9BVI4 516 aaKnown RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 HIPK3Q9H422 1215 aa16.79■□□□□ 0.28
RPP40-201ENST00000319533 ADD3Q9UEY8 706 aaKnown RBP16.79■□□□□ 0.28
RPP40-201ENST00000319533 UMODL1Q5DID0 1318 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 MUC3AQ02505 3323 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 FGAP02671 866 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 FGBP02675 491 aa16.78■□□□□ 0.28
RPP40-201ENST00000319533 TOP1P11387 765 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms