RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TECP42680 631 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 DTHD1Q6ZMT9 781 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 TRAPPC11Q7Z392 1133 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 NELFCDQ8IXH7 590 aa15.81■□□□□ 0.12
PABPC1-201ENST00000318607 CNOT6LQ96LI5 555 aaKnown RBP15.81■□□□□ 0.12
PABPC1-201ENST00000318607 SPAG1Q07617 926 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.8■□□□□ 0.124e-12■□□□□ 10.7
PABPC1-201ENST00000318607 RBM12Q9NTZ6 932 aaKnown RBP15.8■□□□□ 0.12
PABPC1-201ENST00000318607 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 MAGEB6P1A0A0J9YX57 407 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 NUTM2BA6NNL0 878 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-201ENST00000318607 NUTM2EB1AL46 878 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-201ENST00000318607 TMOD1P28289 359 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 TXKP42681 527 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 WDR59Q6PJI9 974 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 SPATA4Q8NEY3 305 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 GPR108Q9NPR9 543 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 RIPOR2Q9Y4F9 1068 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 KDM6AO15550 1401 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-201ENST00000318607 BUB1BO60566 1050 aaPredicted RBP15.8■□□□□ 0.12
PABPC1-201ENST00000318607 MCTP2Q6DN12 878 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 AP1M1Q9BXS5 423 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 TMEM60Q9H2L4 133 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 SLC24A3Q9HC58 644 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 HYOU1Q9Y4L1 999 aa15.8■□□□□ 0.12
PABPC1-201ENST00000318607 EPHB6O15197 1021 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 HEXIM1O94992 359 aaKnown RBP15.79■□□□□ 0.12
PABPC1-201ENST00000318607 VAV2P52735 878 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 CTSWP56202 376 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 UBLCP1Q8WVY7 318 aaPredicted RBP15.79■□□□□ 0.12
PABPC1-201ENST00000318607 LIFRP42702 1097 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 AMPD2Q01433 879 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 STK4Q13043 487 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 UBE3CQ15386 1083 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
PABPC1-201ENST00000318607 ZIM3Q96PE6 472 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 ZBTB1Q9Y2K1 713 aa15.79■□□□□ 0.12
PABPC1-201ENST00000318607 CHRM1P11229 460 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 CDC25CP30307 473 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 IL17AQ16552 155 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 SRBD1Q8N5C6 995 aaKnown RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 ZSCAN10Q96SZ4 725 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 LRRC37A3O60309 1634 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 GOLGA6L10A6NI86 522 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 SKAP2O75563 359 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 SGMS1Q86VZ5 419 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 ACSBG1Q96GR2 724 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 SF3B2Q13435 895 aaKnown RBP15.78■□□□□ 0.12
PABPC1-201ENST00000318607 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 CCDC91Q7Z6B0 441 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 STAG2Q8N3U4 1231 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 PLCD4Q9BRC7 762 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 SLIT3O75094 1523 aa15.78■□□□□ 0.12
PABPC1-201ENST00000318607 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 CCNT1O60563 726 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 CIAO1O76071 339 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 PRPF6O94906 941 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 HDLBPQ00341 1268 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 PPFIA1Q13136 1202 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 RAPGEF1Q13905 1077 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 PUM3Q15397 648 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 UBA5Q9GZZ9 404 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 DPH5Q9H2P9 285 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 RNF41Q9H4P4 317 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 SEPT11Q9NVA2 429 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 RWDD2AQ9UIY3 292 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 FAM184BQ9ULE4 1060 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 GTPBP6O43824 516 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 PPP1R12BO60237 982 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 EPS15P42566 896 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 ZNF658Q5TYW1 1059 aaPredicted RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 IRF2BP1Q8IU81 584 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 NCAPGQ9BPX3 1015 aa15.77■□□□□ 0.12
PABPC1-201ENST00000318607 SAP30BPQ9UHR5 308 aaKnown RBP15.77■□□□□ 0.12
PABPC1-201ENST00000318607 STARD3NLO95772 234 aa15.77■□□□□ 0.11
PABPC1-201ENST00000318607 PKN1Q16512 942 aa15.77■□□□□ 0.11
PABPC1-201ENST00000318607 ALS2CR12Q96Q35 445 aa15.77■□□□□ 0.11
PABPC1-201ENST00000318607 MCM9Q9NXL9 1143 aa15.77■□□□□ 0.11
PABPC1-201ENST00000318607 OPA1O60313 960 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 GLI1P08151 1106 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 MCM3P25205 808 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 SLC1A4P43007 532 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 TTMPQ5BVD1 217 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 IQCEQ6IPM2 695 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 PNMA8AQ86V59 439 aaPredicted RBP15.76■□□□□ 0.11
PABPC1-201ENST00000318607 CCDC51Q96ER9 411 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 CXorf56Q9H5V9 222 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 KIF11P52732 1056 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 CCDC40Q4G0X9 1142 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 OSBPL9Q96SU4 736 aa15.76■□□□□ 0.11
PABPC1-201ENST00000318607 PCDHA13Q9Y5I0 950 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms