RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NKRFO15226 690 aaKnown RBP eCLIP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 DDNO94850 711 aaPredicted RBP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ASPRV1Q53RT3 343 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FILIP1Q7Z7B0 1213 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FAM151AQ8WW52 585 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 BCAS3Q9H6U6 928 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 PNMA6FA0A0J9YX94 578 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ENTPD3O75355 529 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ERCC3P19447 782 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 STAT3P40763 770 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 E2F4Q16254 413 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ECM1Q16610 540 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 SOGA3Q5TF21 947 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 CCDC186Q7Z3E2 898 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ZBED3Q96IU2 234 aaPredicted RBP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FANCLQ9NW38 375 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 HDAC9Q9UKV0 1011 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FAM237AA0A1B0GTK4 181 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 CALML3P27482 149 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ZNF75DP51815 510 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FCHSD1Q86WN1 690 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 DRC7Q8IY82 874 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ZNF341Q9BYN7 854 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 DEFB129Q9H1M3 183 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 PSTPIP2Q9H939 334 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 HOMER2Q9NSB8 354 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 FAM13BQ9NYF5 915 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 TUBE1Q9UJT0 475 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ADCY7P51828 1080 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 NONOQ15233 471 aaKnown RBP eCLIP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 KCNK18Q7Z418 384 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 RASSF8Q8NHQ8 419 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 CNKSR2Q8WXI2 1034 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 C6orf50Q9HD87 102 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 SAMSN1Q9NSI8 373 aaKnown RBP7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 ANO10Q9NW15 660 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 GDAQ9Y2T3 454 aa7.95□□□□□ -1.14
LYSMD3-201ENST00000315948 PHF20L1A8MW92 1017 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 MEIS2O14770 477 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 NLRP12P59046 1061 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 RAD51AP2Q09MP3 1159 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CCDC178Q5BJE1 867 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 PDXDC2PQ6P474 469 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CCDC125Q86Z20 511 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CEP57L1Q8IYX8 460 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 MMTAG2Q9BU76 263 aaKnown RBP7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 IFNKQ9P0W0 207 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 NYAP2Q9P242 653 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 PRR12Q9ULL5 1215 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 LAMA3Q16787 3333 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CTAGE5O15320 804 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 NEMFO60524 1076 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 NEK8Q86SG6 692 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 AGBL3Q8NEM8 1001 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 CCDC148Q8NFR7 591 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 NAP1L5Q96NT1 182 aaPredicted RBP7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 SH3GLB2Q9NR46 395 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 GOLGA6L19H0YKK7 550 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 BMP3P12645 472 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 PLA2G4DQ86XP0 818 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 GLIS3Q8NEA6 775 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 MKL1Q969V6 931 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 AGBL1Q96MI9 1066 aa7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 XPO4Q9C0E2 1151 aaKnown RBP7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 GREB1LQ9C091 1923 aaPredicted RBP7.94□□□□□ -1.14
LYSMD3-201ENST00000315948 SMC2O95347 1197 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 PLCG1P19174 1290 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CAP2P40123 477 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CACNB1Q02641 598 aaPredicted RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 DTHD1Q6ZMT9 781 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 MOB2Q70IA6 237 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 TRMT1LQ7Z2T5 733 aaKnown RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CREBRFQ8IUR6 639 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CPXCR1Q8N123 301 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 HAS1Q92839 578 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CEP131Q9UPN4 1083 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 TRIM49BA6NDI0 452 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 FZD9O00144 591 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 KIF4BQ2VIQ3 1234 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 ZSCAN30Q86W11 494 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 LZTS2Q9BRK4 669 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 GGA3Q9NZ52 723 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 BRCA1P38398 1863 aaKnown RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 FER1L6Q2WGJ9 1857 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CFBP00751 764 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 SARSP49591 514 aaKnown RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 PMS1P54277 932 aaKnown RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 UVSSAQ2YD98 709 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 SYDE2Q5VT97 1194 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 DAGLBQ8NCG7 672 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 CACTINQ8WUQ7 758 aaKnown RBP7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 MTMR8Q96EF0 704 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 INTS13Q9NVM9 706 aa7.93□□□□□ -1.14
LYSMD3-201ENST00000315948 FAM86B1E9PN63 330 aa7.92□□□□□ -1.14
LYSMD3-201ENST00000315948 FAM86B2P0C5J1 330 aa7.92□□□□□ -1.14
LYSMD3-201ENST00000315948 GNA11P29992 359 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms