RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MKL1Q969V6 931 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 C12orf42Q96LP6 360 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 JAKMIP1Q96N16 626 aaKnown RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 TTC14Q96N46 770 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 TBC1D32Q96NH3 1257 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
SSX3-201ENST00000298396 KRT23Q9C075 422 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 R3HDMLQ9H3Y0 253 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 CNNM2Q9H8M5 875 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ZNF287Q9HBT7 754 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 CABP5Q9NP86 173 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 TMX2Q9Y320 296 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 ADGRA2Q96PE1 1338 aa6.94□□□□□ -1.3
SSX3-201ENST00000298396 CCL15-CCL14A0A0B4J2E2 113 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 USP17L10C9JJH3 530 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 CXCL11O14625 94 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 PEX10O60683 326 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 TTLL1O95922 423 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 NDUFB10O96000 172 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 VCAM1P19320 739 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 CASTP20810 708 aaKnown RBP6.93□□□□□ -1.3
SSX3-201ENST00000298396 RPS6KB1P23443 525 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 VARSP26640 1264 aaKnown RBP6.93□□□□□ -1.3
SSX3-201ENST00000298396 TM4SF4P48230 202 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 ANAPC15P60006 121 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 TOB2Q14106 344 aaPredicted RBP6.93□□□□□ -1.3
SSX3-201ENST00000298396 CCL15Q16663 113 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 SPICE1Q8N0Z3 855 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 ADAM32Q8TC27 787 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 CHMP4CQ96CF2 233 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 NEK1Q96PY6 1258 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 NUP88Q99567 741 aaPredicted RBP6.93□□□□□ -1.3
SSX3-201ENST00000298396 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 C22orf23Q9BZE7 217 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 UPF3BQ9BZI7 483 aaKnown RBP6.93□□□□□ -1.3
SSX3-201ENST00000298396 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 VCPKMTQ9H867 229 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 AS3MTQ9HBK9 375 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 PKD2L1Q9P0L9 805 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 MAP4K5Q9Y4K4 846 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 WDR19Q8NEZ3 1342 aa6.93□□□□□ -1.3
SSX3-201ENST00000298396 KIAA1217Q5T5P2 1943 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 MANSC4A6NHS7 340 aaPredicted RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 IFIT3O14879 490 aaKnown RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 GDF9O60383 454 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 TOP1P11387 765 aaKnown RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 ZKSCAN1P17029 563 aaPredicted RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 MCM5P33992 734 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 GTF2A2P52657 109 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 CAP1Q01518 475 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 ATP2B2Q01814 1243 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 NOGQ13253 232 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 KRT32Q14532 448 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 TMEM67Q5HYA8 995 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 USP17L2Q6R6M4 530 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 GADL1Q6ZQY3 521 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 RUFY3Q7L099 469 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 DHX32Q7L7V1 743 aaKnown RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 RALYLQ86SE5 291 aaKnown RBP6.92□□□□□ -1.3
SSX3-201ENST00000298396 DGKHQ86XP1 1220 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 GMCL1P1Q8NEA9 526 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 ADAMTS19Q8TE59 1207 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 CDK15Q96Q40 435 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 ARHGAP9Q9BRR9 750 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 MYL10Q9BUA6 226 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 ALG2Q9H553 416 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 ARHGEF10LQ9HCE6 1279 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 FBXO28Q9NVF7 368 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 STX8Q9UNK0 236 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 AGTPBP1Q9UPW5 1226 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 LRRC37A2A6NM11 1700 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 HTTP42858 3142 aa6.92□□□□□ -1.3
SSX3-201ENST00000298396 MYH7BA7E2Y1 1941 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 POM121CA8CG34 1229 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 C19orf81C9J6K1 198 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 F5H6K3 240 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 CNMDO75829 334 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 LARGE1O95461 756 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PDHBP11177 359 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 CETPP11597 493 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 MCCP23508 829 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
SSX3-201ENST00000298396 MAP2K2P36507 400 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 LIFRP42702 1097 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 NT5C2P49902 561 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PRR20EP86478 221 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PRR20CP86479 221 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PRR20DP86480 221 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PRR20BP86481 221 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 PRR20AP86496 221 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 KLRC3Q07444 240 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 VAC14Q08AM6 782 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms