RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PLCD4Q9BRC7 762 aa7.92□□□□□ -1.14
TRA2B-201ENST00000259043 CDADC1Q9BWV3 514 aa7.92□□□□□ -1.14
TRA2B-201ENST00000259043 KRTAP17-1Q9BYP8 105 aa7.92□□□□□ -1.14
TRA2B-201ENST00000259043 GPR55Q9Y2T6 319 aaPredicted RBP7.92□□□□□ -1.14
TRA2B-201ENST00000259043 OR14I1A6ND48 311 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 SASH1O94885 1247 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 ITGA4P13612 1032 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 SLC7A5Q01650 507 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 HSF5Q4G112 596 aaPredicted RBP7.91□□□□□ -1.14
TRA2B-201ENST00000259043 ZNF513Q8N8E2 541 aaPredicted RBP7.91□□□□□ -1.14
TRA2B-201ENST00000259043 SIGLEC10Q96LC7 697 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 XYLT2Q9H1B5 865 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 NOL6Q9H6R4 1146 aaKnown RBP7.91□□□□□ -1.14
TRA2B-201ENST00000259043 WHRNQ9P202 907 aa7.91□□□□□ -1.14
TRA2B-201ENST00000259043 HRKO00198 91 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 EPHX1P07099 455 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 PI3P19957 117 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 RTP1P59025 263 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 KIR3DS1Q14943 382 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 TCEAL1Q15170 157 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 PPP2R5EQ16537 467 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 ANAPC16Q96DE5 110 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 FCRL3Q96P31 734 aaPredicted RBP7.9□□□□□ -1.14
TRA2B-201ENST00000259043 CAPN10Q9HC96 672 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 CRTAC1Q9NQ79 661 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 IRAK3Q9Y616 596 aa7.9□□□□□ -1.14
TRA2B-201ENST00000259043 FGF10O15520 208 aaPredicted RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 GSTM1P09488 218 aa7.89□□□□□ -1.15
TRA2B-201ENST00000259043 FGRP09769 529 aa7.89□□□□□ -1.15
TRA2B-201ENST00000259043 SRSF3P84103 164 aaKnown RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 SLC14A2Q15849 920 aa7.89□□□□□ -1.15
TRA2B-201ENST00000259043 CWF19L1Q69YN2 538 aaKnown RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 HEATR6Q6AI08 1181 aaKnown RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 SIRT2Q8IXJ6 389 aa7.89□□□□□ -1.15
TRA2B-201ENST00000259043 MCMBPQ9BTE3 642 aa7.89□□□□□ -1.15
TRA2B-201ENST00000259043 MBD1Q9UIS9 605 aaPredicted RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 DIS3Q9Y2L1 958 aaKnown RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 SF3B6Q9Y3B4 125 aaKnown RBP7.89□□□□□ -1.15
TRA2B-201ENST00000259043 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
TRA2B-201ENST00000259043 A0A1W2PQ45 241 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-201ENST00000259043 A0A1W2PQY0 241 aa7.88□□□□□ -1.15
TRA2B-201ENST00000259043 ADGRF1Q5T601 910 aa7.88□□□□□ -1.15
TRA2B-201ENST00000259043 VHLLQ6RSH7 139 aa7.88□□□□□ -1.15
TRA2B-201ENST00000259043 ADCY4Q8NFM4 1077 aa7.88□□□□□ -1.15
TRA2B-201ENST00000259043 DACT3Q96B18 629 aaPredicted RBP7.88□□□□□ -1.15
TRA2B-201ENST00000259043 OTOL1A6NHN0 477 aaPredicted RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 IFNGR1P15260 489 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 PNLIPP16233 465 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 AFF3P51826 1226 aaKnown RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 SKOR2Q2VWA4 1001 aaPredicted RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 KIAA1211LQ6NV74 962 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 GALNT18Q6P9A2 607 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 ARHGEF39Q8N4T4 335 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 PANK1Q8TE04 598 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 RCC1LQ96I51 464 aaKnown RBP7.87□□□□□ -1.15
TRA2B-201ENST00000259043 FGD4Q96M96 766 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 ZDHHC15Q96MV8 337 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 JMJD8Q96S16 334 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 SIRT5Q9NXA8 310 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 ACSL6Q9UKU0 697 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 MRVI1Q9Y6F6 885 aa7.87□□□□□ -1.15
TRA2B-201ENST00000259043 WTIPA6NIX2 430 aaPredicted RBP7.86□□□□□ -1.15
TRA2B-201ENST00000259043 SMAD7O15105 426 aaKnown RBP7.86□□□□□ -1.15
TRA2B-201ENST00000259043 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
TRA2B-201ENST00000259043 PPP2R5DQ14738 602 aa7.86□□□□□ -1.15
TRA2B-201ENST00000259043 ERICH6BQ5W0A0 696 aa7.86□□□□□ -1.15
TRA2B-201ENST00000259043 VPS37DQ86XT2 251 aa7.86□□□□□ -1.15
TRA2B-201ENST00000259043 GBP3Q9H0R5 595 aa7.86□□□□□ -1.15
TRA2B-201ENST00000259043 CGGBP1Q9UFW8 167 aaPredicted RBP7.86□□□□□ -1.15
TRA2B-201ENST00000259043 CD3EP07766 207 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 CELA3BP08861 270 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 ETFBP38117 255 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 KRTAP10-2P60368 255 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 ERVFRD-1P60508 538 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 POU4F1Q01851 419 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 MCF2L2Q86YR7 1114 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 APEX2Q9UBZ4 518 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 TAF6LQ9Y6J9 622 aa7.85□□□□□ -1.15
TRA2B-201ENST00000259043 ANKRD34BA5PLL1 514 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 AURKAO14965 403 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 N4BP3O15049 544 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 PPM1BO75688 479 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 SDHBP21912 280 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 GNL2Q13823 731 aaKnown RBP7.84□□□□□ -1.15
TRA2B-201ENST00000259043 RCSD1Q6JBY9 416 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 CYP2R1Q6VVX0 501 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 ADAT2Q7Z6V5 191 aaKnown RBP7.84□□□□□ -1.15
TRA2B-201ENST00000259043 SLC43A3Q8NBI5 491 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 PTCHD1Q96NR3 888 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 GMLQ99445 158 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 IMPACTQ9P2X3 320 aa7.84□□□□□ -1.15
TRA2B-201ENST00000259043 VAMP4O75379 141 aa7.83□□□□□ -1.16
TRA2B-201ENST00000259043 SSBP05455 408 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRA2B-201ENST00000259043 MSL3P1P0C860 447 aa7.83□□□□□ -1.16
TRA2B-201ENST00000259043 PRKCAP17252 672 aa7.83□□□□□ -1.16
TRA2B-201ENST00000259043 EPHB3P54753 998 aa7.83□□□□□ -1.16
TRA2B-201ENST00000259043 YBX1P67809 324 aaKnown RBP7.83□□□□□ -1.16
TRA2B-201ENST00000259043 MVKQ03426 396 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms