RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RTN4Q9NQC3 1192 aaKnown RBP31.4■■■□□ 2.62
CCM2-201ENST00000258781 PPP1R11O60927 126 aaPredicted RBP31.4■■■□□ 2.62
CCM2-201ENST00000258781 MSNP26038 577 aaKnown RBP31.4■■■□□ 2.62
CCM2-201ENST00000258781 SARSP49591 514 aaKnown RBP31.4■■■□□ 2.62
CCM2-201ENST00000258781 SH3RF1Q7Z6J0 888 aa31.4■■■□□ 2.62
CCM2-201ENST00000258781 TRIML1Q8N9V2 468 aa31.4■■■□□ 2.62
CCM2-201ENST00000258781 SMTNL1A8MU46 457 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 F5H6K3 240 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 CLCN1P35523 988 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 KLRC3Q07444 240 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 DTHD1Q6ZMT9 781 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 SMARCE1Q969G3 411 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.39■■■□□ 2.62
CCM2-201ENST00000258781 PITPNM2Q9BZ72 1349 aa31.39■■■□□ 2.62
CCM2-201ENST00000258781 WDR90Q96KV7 1748 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 GOLGA6L6A8MZA4 724 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 IKBKBO14920 756 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 PRR29P0C7W0 189 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 SPATA20Q8TB22 786 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 BIN2Q9UBW5 565 aaPredicted RBP31.38■■■□□ 2.61
CCM2-201ENST00000258781 PHF20L1A8MW92 1017 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 TPM3P06753 285 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 CDC25BP30305 580 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 EPHX2P34913 555 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 TMEM60Q9H2L4 133 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 EIF2AK3Q9NZJ5 1116 aaKnown RBP31.38■■■□□ 2.61
CCM2-201ENST00000258781 MAN1B1Q9UKM7 699 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 ZBTB21Q9ULJ3 1066 aa31.38■■■□□ 2.61
CCM2-201ENST00000258781 SSC5DA1L4H1 1573 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 POTECB2RU33 542 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 SMC2O95347 1197 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 TXLNAP40222 546 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 JAKMIP3Q5VZ66 844 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 IQUBQ8NA54 791 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 TBCKQ8TEA7 893 aa31.37■■■□□ 2.61
CCM2-201ENST00000258781 RAD21O60216 631 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 NDUFB10O96000 172 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 CAP2P40123 477 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 TPM4P67936 248 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 E2F4Q16254 413 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 GLT8D2Q9H1C3 349 aa31.36■■■□□ 2.61
CCM2-201ENST00000258781 LETM2Q2VYF4 491 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 ISM2Q6H9L7 571 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 DLK2Q6UY11 383 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 CUL5Q93034 780 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 PAGE5Q96GU1 130 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 MRPL12P52815 198 aaKnown RBP31.35■■■□□ 2.61
CCM2-201ENST00000258781 GRAMD1CQ8IYS0 662 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 MRFAP1L1Q96HT8 127 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 ARHGEF10LQ9HCE6 1279 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 TMEM260Q9NX78 707 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 FZD1Q9UP38 647 aa31.35■■■□□ 2.61
CCM2-201ENST00000258781 NEMFO60524 1076 aa31.34■■■□□ 2.61
CCM2-201ENST00000258781 CCNT1O60563 726 aaKnown RBP31.34■■■□□ 2.61
CCM2-201ENST00000258781 OR52Z1P0C646 297 aa31.34■■■□□ 2.61
CCM2-201ENST00000258781 MORC3Q14149 939 aa31.34■■■□□ 2.61
CCM2-201ENST00000258781 QRICH1Q2TAL8 776 aa31.34■■■□□ 2.61
CCM2-201ENST00000258781 USP50Q70EL3 339 aaPredicted RBP31.34■■■□□ 2.61
CCM2-201ENST00000258781 PPP2R3BQ9Y5P8 575 aa31.34■■■□□ 2.61
CCM2-201ENST00000258781 CLK2P49760 499 aaKnown RBP31.33■■■□□ 2.61
CCM2-201ENST00000258781 NCAPHQ15003 741 aa31.33■■■□□ 2.61
CCM2-201ENST00000258781 DACH1Q9UI36 760 aa31.33■■■□□ 2.61
CCM2-201ENST00000258781 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.33■■■□□ 2.61
CCM2-201ENST00000258781 CDC37Q16543 378 aaPredicted RBP31.33■■■□□ 2.61
CCM2-201ENST00000258781 MLKLQ8NB16 471 aa31.33■■■□□ 2.61
CCM2-201ENST00000258781 A0A1W2PRG0 241 aa31.32■■■□□ 2.6
CCM2-201ENST00000258781 BMP3P12645 472 aa31.32■■■□□ 2.6
CCM2-201ENST00000258781 PDXDC2PQ6P474 469 aa31.32■■■□□ 2.6
CCM2-201ENST00000258781 BTNL9Q6UXG8 535 aa31.32■■■□□ 2.6
CCM2-201ENST00000258781 AK8Q96MA6 479 aa31.32■■■□□ 2.6
CCM2-201ENST00000258781 TAF1DQ9H5J8 278 aaPredicted RBP31.32■■■□□ 2.6
CCM2-201ENST00000258781 ADM5C9JUS6 153 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 BMP6P22004 513 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 DCPSQ96C86 337 aaKnown RBP31.31■■■□□ 2.6
CCM2-201ENST00000258781 CCSER1Q9C0I3 900 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 DOCK1Q14185 1865 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 MYL5Q02045 173 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 CCDC84Q86UT8 332 aaPredicted RBP31.31■■■□□ 2.6
CCM2-201ENST00000258781 SPC24Q8NBT2 197 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 PSTPIP2Q9H939 334 aa31.31■■■□□ 2.6
CCM2-201ENST00000258781 ECE1P42892 770 aa31.3■■■□□ 2.6
CCM2-201ENST00000258781 DPYDQ12882 1025 aa31.3■■■□□ 2.6
CCM2-201ENST00000258781 SYDE2Q5VT97 1194 aa31.3■■■□□ 2.6
CCM2-201ENST00000258781 TMX2Q9Y320 296 aa31.3■■■□□ 2.6
CCM2-201ENST00000258781 IQCA1LA6NCM1 817 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 AFMP43652 599 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 GSDMAQ96QA5 445 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 MYH7BA7E2Y1 1941 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 ZNF500O60304 480 aaPredicted RBP31.29■■■□□ 2.6
CCM2-201ENST00000258781 INPP5BP32019 993 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 CT47A1Q5JQC4 288 aaPredicted RBP31.29■■■□□ 2.6
CCM2-201ENST00000258781 DCAF15Q66K64 600 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 SULF1Q8IWU6 871 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 ACER1Q8TDN7 264 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 NUP88Q99567 741 aaPredicted RBP31.29■■■□□ 2.6
CCM2-201ENST00000258781 GOPCQ9HD26 462 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 DISC1Q9NRI5 854 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 PCDHA1Q9Y5I3 950 aa31.29■■■□□ 2.6
CCM2-201ENST00000258781 ASNSP08243 561 aa31.28■■■□□ 2.6
CCM2-201ENST00000258781 EAPPQ56P03 285 aaPredicted RBP31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms