RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 C6orf50Q9HD87 102 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
PDLIM4-201ENST00000253754 KIF2AO00139 706 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 ARHGAP6O43182 974 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 NELFBQ8WX92 580 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 SERPINA10Q9UK55 444 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 BCS1LQ9Y276 419 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 PSMD14O00487 310 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 FANCGO15287 622 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 ZNF658Q5TYW1 1059 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 KRT25Q7Z3Z0 450 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 CCDC12Q8WUD4 166 aaPredicted RBP21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 CPLX3Q8WVH0 158 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 COA7Q96BR5 231 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 GPCPD1Q9NPB8 672 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 PLIN4Q96Q06 1357 aa21.09■□□□□ 0.97
PDLIM4-201ENST00000253754 PRCPP42785 496 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 PAK1Q13153 545 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 PDCL2Q8N4E4 241 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 TBCKQ8TEA7 893 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 RIOX1Q9H6W3 641 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 RWDD2AQ9UIY3 292 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 PPP2R2CQ9Y2T4 447 aa21.08■□□□□ 0.97
PDLIM4-201ENST00000253754 OR52Z1P0C646 297 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 GNA11P29992 359 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 PBX1P40424 430 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 RBL2Q08999 1139 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 RSBN1LQ6PCB5 846 aaPredicted RBP21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 CREBRFQ8IUR6 639 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 NIM1KQ8IY84 436 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 IGSF22Q8N9C0 903 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 VPS33BQ9H267 617 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 TAOK3Q9H2K8 898 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 SERPINB13Q9UIV8 391 aa21.08■□□□□ 0.96
PDLIM4-201ENST00000253754 IGKV6D-41A0A0C4DH26 115 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 SHMT1P34896 483 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 TCP10Q12799 353 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 MTF1Q14872 753 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 KRT31Q15323 416 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 TRIM65Q6PJ69 517 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 NEK8Q86SG6 692 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 ZFPM1Q8IX07 1006 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 LRRN4CLQ8ND94 238 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 DESI2Q9BSY9 194 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 DNAI1Q9UI46 699 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 ZNRF3Q9ULT6 936 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 ZBTB12Q9Y330 459 aaPredicted RBP21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 PSME4Q14997 1843 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 TRIM49BA6NDI0 452 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 FAM177A1Q8N128 213 aaPredicted RBP21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 REXO1Q8N1G1 1221 aaKnown RBP21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 RMND1Q9NWS8 449 aa21.07■□□□□ 0.96
PDLIM4-201ENST00000253754 STX10O60499 249 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 VIL1P09327 827 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 PLCG1P19174 1290 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 PRPHP41219 470 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 TECP42680 631 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 ETF1P62495 437 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 KMT5BQ4FZB7 885 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 PPP4R3BQ5MIZ7 849 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 CCSER1Q9C0I3 900 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 AKR1B15C9JRZ8 316 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 LAD1O00515 517 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 KLRC4O43908 158 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 PMS1P54277 932 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 SHROOM1Q2M3G4 852 aaPredicted RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 TTBK2Q6IQ55 1244 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 CABP7Q86V35 215 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 VPS16Q9H269 839 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 TDRD3Q9H7E2 651 aaKnown RBP21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 TAB2Q9NYJ8 693 aa21.06■□□□□ 0.96
PDLIM4-201ENST00000253754 FER1L6Q2WGJ9 1857 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 SOWAHDA6NJG2 315 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 CCP110O43303 1012 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 SMARCA1P28370 1054 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 PRMT6Q96LA8 375 aaPredicted RBP21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 CTAGE1Q96RT6 745 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 KBTBD4Q9NVX7 518 aa21.05■□□□□ 0.96
PDLIM4-201ENST00000253754 FAM196BA6NMK8 535 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 TTLL1O95922 423 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 SNHG28P0DPA3 235 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 SYCP1Q15431 976 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 FCHSD1Q86WN1 690 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 MYO3BQ8WXR4 1341 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 NFKBIEO00221 500 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 SLC16A2P36021 539 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 FILIP1LQ4L180 1135 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 ASPRV1Q53RT3 343 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 ADSSL1Q8N142 457 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 L2HGDHQ9H9P8 463 aa21.04■□□□□ 0.96
PDLIM4-201ENST00000253754 KCNJ18B7U540 433 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 ZSCAN12O43309 604 aa21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 PPP1R11O60927 126 aaPredicted RBP21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 SLU7O95391 586 aaKnown RBP21.03■□□□□ 0.96
PDLIM4-201ENST00000253754 CASP14P31944 242 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms