RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GALNT17Q6IS24 598 aa17.74■□□□□ 0.43
LRFN1-201ENST00000248668 APOBEC3HQ6NTF7 200 aaKnown RBP17.74■□□□□ 0.43
LRFN1-201ENST00000248668 TEKT1Q969V4 418 aa17.74■□□□□ 0.43
LRFN1-201ENST00000248668 SHMT1P34896 483 aa17.74■□□□□ 0.43
LRFN1-201ENST00000248668 KCND1Q9NSA2 647 aa17.74■□□□□ 0.43
LRFN1-201ENST00000248668 CHRNA5P30532 468 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 LZTFL1Q9NQ48 299 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 KCNJ18B7U540 433 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 SLC37A4O43826 429 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 SLU7O95391 586 aaKnown RBP17.73■□□□□ 0.43
LRFN1-201ENST00000248668 FXR1P51114 621 aaKnown RBP eCLIP17.73■□□□□ 0.43
LRFN1-201ENST00000248668 GNG11P61952 73 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 KCNJ12Q14500 433 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 TRIM65Q6PJ69 517 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 ADGRF4Q8IZF3 695 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
LRFN1-201ENST00000248668 TTLL1O95922 423 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 CRKP46108 304 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 SNAP25P60880 206 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 WDR24Q96S15 920 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 RWDD2AQ9UIY3 292 aa17.73■□□□□ 0.43
LRFN1-201ENST00000248668 POTEMA6NI47 508 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 USP17L10C9JJH3 530 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 ASIC1P78348 528 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 PYM1Q9BRP8 204 aaKnown RBP17.72■□□□□ 0.43
LRFN1-201ENST00000248668 RMND1Q9NWS8 449 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 RNF225M0QZC1 329 aaPredicted RBP17.72■□□□□ 0.43
LRFN1-201ENST00000248668 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 ADCY7P51828 1080 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 COPB1P53618 953 aaKnown RBP17.72■□□□□ 0.43
LRFN1-201ENST00000248668 ERCC6LQ2NKX8 1250 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 C2CD5Q86YS7 1000 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 TRIM47Q96LD4 638 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 RIOX1Q9H6W3 641 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 BRWD3Q6RI45 1802 aa17.72■□□□□ 0.43
LRFN1-201ENST00000248668 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 STX10O60499 249 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.43
LRFN1-201ENST00000248668 GYPCP04921 128 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 FCER1AP12319 257 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 ERCC3P19447 782 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 KCNJ6P48051 423 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 RAD9BQ6WBX8 426 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 MRPL44Q9H9J2 332 aaKnown RBP17.71■□□□□ 0.43
LRFN1-201ENST00000248668 ADAMTSL1Q8N6G6 1762 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 ERICH4A6NGS2 130 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 HLA-DOAP06340 250 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 PDE6BP35913 854 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 TCP11X2Q5H9J9 407 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 MASTLQ96GX5 879 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 NUP88Q99567 741 aaPredicted RBP17.71■□□□□ 0.43
LRFN1-201ENST00000248668 SRRTQ9BXP5 876 aaKnown RBP17.71■□□□□ 0.43
LRFN1-201ENST00000248668 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
LRFN1-201ENST00000248668 KLRC4O43908 158 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 UBXN1Q04323 297 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 PDE4DQ08499 809 aa17.71■□□□□ 0.43
LRFN1-201ENST00000248668 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
LRFN1-201ENST00000248668 CALCRLQ16602 461 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 DYMQ7RTS9 669 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 TMC4Q7Z404 712 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 CCSER1Q9C0I3 900 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 DNAJC18Q9H819 358 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 CCP110O43303 1012 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 GDF11O95390 407 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 ZNF543Q08ER8 600 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 ASPRV1Q53RT3 343 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 ADSSL1Q8N142 457 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 NT5C2P49902 561 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 MMTAG2Q9BU76 263 aaKnown RBP17.7■□□□□ 0.42
LRFN1-201ENST00000248668 KBTBD4Q9NVX7 518 aa17.7■□□□□ 0.42
LRFN1-201ENST00000248668 MFAP3LO75121 409 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 PBX1P40424 430 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
LRFN1-201ENST00000248668 STK4Q13043 487 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 ANKRD31Q8N7Z5 1873 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 ANKRD20A12PQ8NF67 263 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 ERO1AQ96HE7 468 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 NUDT12Q9BQG2 462 aa17.69■□□□□ 0.42
LRFN1-201ENST00000248668 MARCH6O60337 910 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 MCM6Q14566 821 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 AOC3Q16853 763 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 ACRBPQ8NEB7 543 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 SLC39A2Q9NP94 309 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.68■□□□□ 0.42
LRFN1-201ENST00000248668 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
LRFN1-201ENST00000248668 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms