RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 RHOBTB3O94955 611 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 NAA15Q9BXJ9 866 aaKnown RBP24.65■■□□□ 1.54
RNF39-201ENST00000244360 SHMT1P34896 483 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 PDE6BP35913 854 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 RBL2Q08999 1139 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 TOGARAM2Q6ZUX3 1019 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 ZNF771Q7L3S4 317 aaPredicted RBP24.65■■□□□ 1.54
RNF39-201ENST00000244360 CABP7Q86V35 215 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 PPFIBP1Q86W92 1011 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 LRRC47Q8N1G4 583 aaKnown RBP24.65■■□□□ 1.54
RNF39-201ENST00000244360 RASSF8Q8NHQ8 419 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 TBCKQ8TEA7 893 aa24.65■■□□□ 1.54
RNF39-201ENST00000244360 FRMPD2Q68DX3 1309 aaPredicted RBP24.64■■□□□ 1.54
RNF39-201ENST00000244360 TTLL1O95922 423 aa24.64■■□□□ 1.54
RNF39-201ENST00000244360 FECHP22830 423 aa24.64■■□□□ 1.54
RNF39-201ENST00000244360 TCP11X2Q5H9J9 407 aa24.64■■□□□ 1.54
RNF39-201ENST00000244360 CDC42EP5Q6NZY7 148 aa24.64■■□□□ 1.54
RNF39-201ENST00000244360 ADAMTSL1Q8N6G6 1762 aa24.64■■□□□ 1.53
RNF39-201ENST00000244360 H7C1D1 291 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 PLSCR1O15162 318 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 MFAP3LO75121 409 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 TERF2Q15554 542 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 DOK7Q18PE1 504 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 APOBEC3HQ6NTF7 200 aaKnown RBP24.63■■□□□ 1.53
RNF39-201ENST00000244360 PPP1R18Q6NYC8 613 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 MXD3Q9BW11 206 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 FANCGO15287 622 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 ATP8B1O43520 1251 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 PLCG1P19174 1290 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 COPB1P53618 953 aaKnown RBP24.63■■□□□ 1.53
RNF39-201ENST00000244360 ZNF543Q08ER8 600 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 TMCO3Q6UWJ1 677 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 GIMAP8Q8ND71 665 aaPredicted RBP24.63■■□□□ 1.53
RNF39-201ENST00000244360 TEKT1Q969V4 418 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 CCDC51Q96ER9 411 aa24.63■■□□□ 1.53
RNF39-201ENST00000244360 KCNJ18B7U540 433 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 COBLO75128 1261 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 GNG11P61952 73 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 KCNJ12Q14500 433 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 EHD4Q9H223 541 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 BIN2Q9UBW5 565 aaPredicted RBP24.62■■□□□ 1.53
RNF39-201ENST00000244360 ADCY7P51828 1080 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 MAP3K9P80192 1104 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 ANKRD20A12PQ8NF67 263 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 CARD6Q9BX69 1037 aa24.62■■□□□ 1.53
RNF39-201ENST00000244360 GYPCP04921 128 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 SCNN1DP51172 638 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 JAKMIP3Q5VZ66 844 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 CNGA4Q8IV77 575 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 MTMR9Q96QG7 549 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 TMEM260Q9NX78 707 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 N4BP3O15049 544 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 CCDC175P0C221 793 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 CCT6AP40227 531 aaKnown RBP24.61■■□□□ 1.53
RNF39-201ENST00000244360 IRF2BP1Q8IU81 584 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 CLEC10AQ8IUN9 316 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 FLAD1Q8NFF5 587 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 MMTAG2Q9BU76 263 aaKnown RBP24.61■■□□□ 1.53
RNF39-201ENST00000244360 FHOD1Q9Y613 1164 aa24.61■■□□□ 1.53
RNF39-201ENST00000244360 PLIN2Q99541 437 aa24.6■■□□□ 1.53
RNF39-201ENST00000244360 C7orf25Q9BPX7 421 aa24.6■■□□□ 1.53
RNF39-201ENST00000244360 JMJD4Q9H9V9 463 aa24.6■■□□□ 1.53
RNF39-201ENST00000244360 MRFAP1Q9Y605 127 aa24.6■■□□□ 1.53
RNF39-201ENST00000244360 PNMA6FA0A0J9YX94 578 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 ZRANB2O95218 330 aaKnown RBP eCLIP24.59■■□□□ 1.53
RNF39-201ENST00000244360 HLA-DOAP06340 250 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 MMP10P09238 476 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 PODNQ7Z5L7 613 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 POTEDQ86YR6 584 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 COA7Q96BR5 231 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 TRIM9Q9C026 710 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 MAPK8IP1Q9UQF2 711 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 EDIL3O43854 480 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 EIF6P56537 245 aaKnown RBP24.59■■□□□ 1.53
RNF39-201ENST00000244360 STIM1Q13586 685 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 TRIM14Q14142 442 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 ZDHHC15Q96MV8 337 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 MRIQ9BWK5 157 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 THAP9Q9H5L6 903 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 GPCPD1Q9NPB8 672 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 TAB2Q9NYJ8 693 aa24.59■■□□□ 1.53
RNF39-201ENST00000244360 SOWAHDA6NJG2 315 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 PSMA7O14818 248 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 PNMA6AP0CW24 399 aaPredicted RBP24.58■■□□□ 1.53
RNF39-201ENST00000244360 CASP14P31944 242 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 FXR1P51114 621 aaKnown RBP eCLIP24.58■■□□□ 1.53
RNF39-201ENST00000244360 FXR2P51116 673 aaKnown RBP eCLIP24.58■■□□□ 1.53
RNF39-201ENST00000244360 FKBP1AP62942 108 aaKnown RBP24.58■■□□□ 1.53
RNF39-201ENST00000244360 GPATCH4Q5T3I0 446 aaKnown RBP24.58■■□□□ 1.53
RNF39-201ENST00000244360 TAF3Q5VWG9 929 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 GPR161Q8N6U8 529 aaKnown RBP24.58■■□□□ 1.53
RNF39-201ENST00000244360 KIFC2Q96AC6 838 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
RNF39-201ENST00000244360 RIC8AQ9NPQ8 531 aa24.58■■□□□ 1.53
RNF39-201ENST00000244360 EEF1GP26641 437 aaKnown RBP24.58■■□□□ 1.52
RNF39-201ENST00000244360 TECP42680 631 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 CRKP46108 304 aa24.58■■□□□ 1.52
RNF39-201ENST00000244360 PMS1P54277 932 aaKnown RBP24.58■■□□□ 1.52
RNF39-201ENST00000244360 MTF1Q14872 753 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms