RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 KCNJ14Q9UNX9 436 aa7.36□□□□□ -1.23
CSMD2-201ENST00000241312 ESYT2A0FGR8 921 aa7.36□□□□□ -1.23
CSMD2-201ENST00000241312 ECE1P42892 770 aa7.36□□□□□ -1.23
CSMD2-201ENST00000241312 EHHADHQ08426 723 aa7.36□□□□□ -1.23
CSMD2-201ENST00000241312 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
CSMD2-201ENST00000241312 ATP10DQ9P241 1426 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 RSBN1LQ6PCB5 846 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 FNBP4Q8N3X1 1017 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 CDCA7Q9BWT1 371 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 JAK2O60674 1132 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 AOC3Q16853 763 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 FAM178BQ8IXR5 827 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LAD1O00515 517 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 DDAH1O94760 285 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 APOEP02649 317 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 STAMQ92783 540 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 JRKLQ9Y4A0 524 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 PALM3A6NDB9 673 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 OATP04181 439 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LPIN2Q92539 896 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 STX1BP61266 288 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 PDE1BQ01064 536 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LRRC43Q8N309 656 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 H2AFZP0C0S5 128 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 EIF6P56537 245 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 NSMFQ6X4W1 530 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 H2AFVQ71UI9 128 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 DYMQ7RTS9 669 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LRRC8AQ8IWT6 810 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 NME8Q8N427 588 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 KLHDC4Q8TBB5 520 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 ATP8A2Q9NTI2 1148 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 CDC23Q9UJX2 597 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 PACSIN2Q9UNF0 486 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 NUB1Q9Y5A7 615 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 MAD1L1Q9Y6D9 718 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 SYNMO15061 1565 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 CTDSPL2Q05D32 466 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 EXOC4Q96A65 974 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 TCOF1Q13428 1488 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 ZNF532Q9HCE3 1301 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 E7EWF7 191 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 RPN1P04843 607 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 VPS41P49754 854 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 ALS2CLQ60I27 953 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 MAEAQ7L5Y9 396 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 COL4A3BPQ9Y5P4 624 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 PFKFB2O60825 505 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 ZNF654Q8IZM8 581 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 GLG1Q92896 1179 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LRRC59Q96AG4 307 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 INTS9Q9NV88 658 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 WDR70Q9NW82 654 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 VPS54Q9P1Q0 977 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 A6NJR5 290 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 RBM6P78332 1123 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 DHX9Q08211 1270 aaKnown RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 LRMPQ12912 555 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 NLRX1Q86UT6 975 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 BLIDQ8IZY5 108 aa7.35□□□□□ -1.23
CSMD2-201ENST00000241312 EPN1Q9Y6I3 576 aaPredicted RBP7.35□□□□□ -1.23
CSMD2-201ENST00000241312 TYW5A2RUC4 315 aaKnown RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 MAP3K7O43318 606 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ZBED4O75132 1171 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 HSPA6P17066 643 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ATP5JP18859 108 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 TRAPPC10P48553 1259 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ZNF274Q96GC6 653 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 PBRM1Q86U86 1689 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 DDX39AO00148 427 aaKnown RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 PIK3CAP42336 1068 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 BFSP1Q12934 665 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 CUL1Q13616 776 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ME3Q16798 604 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 SPATA1Q5VX52 437 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 G2E3Q7L622 706 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 SKA2Q8WVK7 121 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 GPC4O75487 556 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 HOXA7P31268 230 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 CEBPAP49715 358 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 DBNDD2Q9BQY9 259 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 RNF14Q9UBS8 474 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 SCINQ9Y6U3 715 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 CTNND1O60716 968 aaKnown RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ACTR5Q9H9F9 607 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 HESX1Q9UBX0 185 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 TNFAIP1Q13829 316 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 KRT26Q7Z3Y9 468 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ZNF710Q8N1W2 664 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 ZBTB7BO15156 539 aaPredicted RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 PCP11498 1178 aaKnown RBP7.34□□□□□ -1.23
CSMD2-201ENST00000241312 PPP2R5AQ15172 486 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 EXOC3L4Q17RC7 722 aa7.34□□□□□ -1.23
CSMD2-201ENST00000241312 FAM102BQ5T8I3 360 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms